RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 PTGER4P35408 488 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 TTC32Q5I0X7 151 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 UNQ5815/PRO19632Q6UWF5 114 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 RNF133Q8WVZ7 376 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 SPACA5Q96QH8 159 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 C20orf144Q9BQM9 153 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 COL25A1Q9BXS0 654 aaPredicted RBP7.45□□□□□ -1.22
PBRM1-209ENST00000412587 PBOV1Q9GZY1 135 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 CHODLQ9H9P2 273 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 PLSCR2Q9NRY7 297 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 C20orf141Q9NUB4 165 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 PRR13Q9NZ81 148 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 PSME4Q14997 1843 aa7.45□□□□□ -1.22
PBRM1-209ENST00000412587 CEP250Q9BV73 2442 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 ZNF17P17021 662 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 INSM1Q01101 510 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PAX2Q02962 417 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 ADAT3Q96EY9 351 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 TIMD4Q96H15 378 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 LOXL4Q96JB6 756 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PGLYRP3Q96LB9 341 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 MAP1LC3CQ9BXW4 147 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 OR2D2Q9H210 308 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 NAA60Q9H7X0 242 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 GREB1LQ9C091 1923 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 KIR2DS1A0A191URI9 304 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 NUDT3O95989 172 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 CA2P00918 260 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 CTSDP07339 412 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 ESDP10768 282 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 SRD5A2P31213 254 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 WNT5AP41221 380 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 KIR2DS4P43632 304 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 IER3P46695 156 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PMP22Q01453 160 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 KIR2DS1Q14954 304 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 LY6G6FQ5SQ64 297 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 TSEN54Q7Z6J9 526 aaKnown RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 RASL10BQ96S79 203 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 TMEM242Q9NWH2 141 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PSENENQ9NZ42 101 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 A0A0G2JK05 382 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 SERTM2A0A1B0GWG4 89 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 OR4C45A6NMZ5 311 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 GDF9O60383 454 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PITX3O75364 302 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 TDGF1P13385 188 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 HIST1H1DP16402 221 aaKnown RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 CDAP32320 146 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 GPM6AP51674 278 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 DYNLT3P51808 116 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 SP6Q3SY56 376 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 SPANXN5Q5MJ07 72 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PRAMEF5Q5TYX0 476 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PRAMEF6Q5VXH4 476 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 MTCH1Q9NZJ7 389 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 JKAMPQ9P055 326 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 FOXD3Q9UJU5 478 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 RIF1Q5UIP0 2472 aaKnown RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 C21orf140B9A014 251 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 CHEK1O14757 476 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 LGALS4P56470 323 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 ZNF121P58317 390 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 P2RY6Q15077 328 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 TEX38Q6PEX7 206 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 LSRQ86X29 649 aaPredicted RBP7.44□□□□□ -1.22
PBRM1-209ENST00000412587 DEFB108BQ8NET1 73 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 OR10S1Q8NGN2 331 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 C4orf45Q96LM5 186 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 VSTM2LQ96N03 204 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 GPA33Q99795 319 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 PMCHL2Q9BQD1 86 aa7.44□□□□□ -1.22
PBRM1-209ENST00000412587 MSGN1A6NI15 193 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 HS3ST1O14792 307 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 ENSAO43768 121 aaKnown RBP7.43□□□□□ -1.22
PBRM1-209ENST00000412587 PSG6Q00889 435 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 RNPS1Q15287 305 aaKnown RBP7.43□□□□□ -1.22
PBRM1-209ENST00000412587 RNASE8Q8TDE3 154 aaKnown RBP7.43□□□□□ -1.22
PBRM1-209ENST00000412587 RAB40CQ96S21 281 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 PPIHO43447 177 aaKnown RBP7.43□□□□□ -1.22
PBRM1-209ENST00000412587 PEBP1P30086 187 aaKnown RBP7.43□□□□□ -1.22
PBRM1-209ENST00000412587 CEACAM8P31997 349 aaPredicted RBP7.43□□□□□ -1.22
PBRM1-209ENST00000412587 UQCRFS1P47985 274 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 SLC25A1P53007 311 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 SLC22A18ASQ8N1D0 253 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 MRPL24Q96A35 216 aaKnown RBP7.43□□□□□ -1.22
PBRM1-209ENST00000412587 TUSC2O75896 110 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 NPY1RP25929 384 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 EFNB2P52799 333 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 TCTAP57738 103 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 NHLRC2Q8NBF2 726 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 OR5A1Q8NGJ0 315 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 OTOSQ8NHW6 89 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 ATP6V0BQ99437 205 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 G6PC2Q9NQR9 355 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 PRDM6Q9NQX0 595 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 SIPA1L1O43166 1804 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 GAGE12BA1L429 117 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 M0QZ24 198 aa7.43□□□□□ -1.22
PBRM1-209ENST00000412587 HLA-GP17693 338 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms