RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 TOX4O94842 621 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 HLA-DMAP28067 261 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 HRH1P35367 487 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 LOXL3P58215 753 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 DEFA1P59665 94 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 DEFA3P59666 94 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 KLF9Q13886 244 aaPredicted RBP15.31■□□□□ 0.04
CDC42-204ENST00000411827 RNASE12Q5GAN4 147 aaKnown RBP15.31■□□□□ 0.04
CDC42-204ENST00000411827 ZNF57Q68EA5 555 aaPredicted RBP15.31■□□□□ 0.04
CDC42-204ENST00000411827 DHRS11Q6UWP2 260 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 C11orf42Q8N5U0 333 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 OR6F1Q8NGZ6 308 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 RFESDQ8TAC1 157 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 GIMAP1Q8WWP7 306 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 MAFIPQ8WZ33 124 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 SIRPDQ9H106 197 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 LPAR2Q9HBW0 351 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 GFOD1Q9NXC2 390 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 AUP1Q9Y679 476 aa15.31■□□□□ 0.04
CDC42-204ENST00000411827 IGKV1D-8A0A087WSZ0 117 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 CD3DP04234 171 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 RAB7AP51149 207 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 BPIFB3P59826 476 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 TSPAN5P62079 268 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 C16orf87Q6PH81 154 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 CREB3L1Q96BA8 519 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 CYYR1Q96J86 154 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 PRRT1Q99946 306 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 TMEM133Q9H2Q1 129 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 EHFQ9NZC4 300 aa15.3■□□□□ 0.04
CDC42-204ENST00000411827 J3QRK9 145 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 BET1O15155 118 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 LANCL1O43813 399 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 SLC22A5O76082 557 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 CEACAM6P40199 344 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 ECI1P42126 302 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 PRRX1P54821 245 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 HERPUD1Q15011 391 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 IGSF11Q5DX21 431 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 PRAMEF5Q5TYX0 476 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 Q8N7P7 452 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 OR9G1Q8NH87 305 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 ZNF596Q8TC21 504 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 UPRTQ96BW1 309 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 C7orf69Q9H7B7 122 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 ABCB10Q9NRK6 738 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 ZNF69Q9UC07 566 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 SCP2D1Q9UJQ7 156 aa15.29■□□□□ 0.04
CDC42-204ENST00000411827 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.28■□□□□ 0.048e-8■■■■■ 31.9
CDC42-204ENST00000411827 KIAA2026Q5HYC2 2103 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 HIVEP1P15822 2718 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 ITPR3Q14573 2671 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 IGKV1-6A0A0C4DH72 117 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 CD5LO43866 347 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 PMP2P02689 132 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 MMP9P14780 707 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 NFYBP25208 207 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 DCTN2Q13561 401 aaKnown RBP15.28■□□□□ 0.04
CDC42-204ENST00000411827 MORN2Q502X0 79 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 MZT2BQ6NZ67 158 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 LPCAT3Q6P1A2 487 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 FAHD2BQ6P2I3 314 aaPredicted RBP15.28■□□□□ 0.04
CDC42-204ENST00000411827 H1FOOQ8IZA3 346 aaPredicted RBP15.28■□□□□ 0.04
CDC42-204ENST00000411827 CIARTQ8N365 385 aaPredicted RBP15.28■□□□□ 0.04
CDC42-204ENST00000411827 LINC00311Q8N616 119 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 MAPK1IP1LQ8NDC0 245 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 OR2AK2Q8NG84 335 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 OR11H6Q8NGC7 330 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 FAHD2AQ96GK7 314 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 CLEC7AQ9BXN2 247 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 SLC2A8Q9NY64 477 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 KCNS2Q9ULS6 477 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 OR2W1Q9Y3N9 320 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 F8P00451 2351 aa15.28■□□□□ 0.04
CDC42-204ENST00000411827 MAP1AP78559 2803 aaPredicted RBP15.28■□□□□ 0.04
CDC42-204ENST00000411827 MED13LQ71F56 2210 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 TOR1AO14656 332 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 SMAD7O15105 426 aaKnown RBP15.27■□□□□ 0.04
CDC42-204ENST00000411827 TUSC2O75896 110 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 FCER2P06734 321 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 OMGP23515 440 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 RFX2P48378 723 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 UBE2E1P51965 193 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 MSMO1Q15800 293 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 PLA1AQ53H76 456 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 VMO1Q7Z5L0 202 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 ABHD12Q8N2K0 398 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 BEND2Q8NDZ0 799 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 OR4C16Q8NGL9 310 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 SCGB3A2Q96PL1 93 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 RDH8Q9NYR8 311 aa15.27■□□□□ 0.04
CDC42-204ENST00000411827 AMMECR1Q9Y4X0 333 aaPredicted RBP15.27■□□□□ 0.04
CDC42-204ENST00000411827 MEX3AA1L020 520 aaKnown RBP15.26■□□□□ 0.03
CDC42-204ENST00000411827 AMY2AP04746 511 aa15.26■□□□□ 0.03
CDC42-204ENST00000411827 CD99P14209 185 aa15.26■□□□□ 0.03
CDC42-204ENST00000411827 FCGR2CP31995 323 aa15.26■□□□□ 0.03
CDC42-204ENST00000411827 HERV-K104P61576 105 aa15.26■□□□□ 0.03
CDC42-204ENST00000411827 ASAH1Q13510 395 aa15.26■□□□□ 0.03
CDC42-204ENST00000411827 OR52L2PQ8NGH6 319 aa15.26■□□□□ 0.03
CDC42-204ENST00000411827 TERB2Q8NHR7 220 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms