RNA–Protein interactions for RNA: ENST00000411809.6

CLINT1-201, Transcript of clathrin interactor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLINT1, Length 3,440 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-201ENST00000411809 PTBP3O95758 552 aaKnown RBP11.11□□□□□ -0.63
CLINT1-201ENST00000411809 IAPPP10997 89 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 MAS1LP35410 378 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 APLNRP35414 380 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 Q3ZCU0 254 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 VASH2Q86V25 355 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 TMEM222Q9H0R3 208 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 ARRDC1-AS1Q9H2J1 176 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 CCL28Q9NRJ3 127 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 AKAP6Q13023 2319 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 IGKV1D-13A0A0B4J2D9 117 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 IGKV1-13P0DP09 117 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 ELLP55199 621 aaPredicted RBP11.11□□□□□ -0.63
CLINT1-201ENST00000411809 PCBD1P61457 104 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 TLE4Q04727 773 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 ADIRFQ15847 76 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 REC114Q7Z4M0 266 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 CALHM1Q8IU99 346 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 MDS2Q8NDY4 140 aa11.11□□□□□ -0.63
CLINT1-201ENST00000411809 THOC3Q96J01 351 aaKnown RBP11.11□□□□□ -0.63
CLINT1-201ENST00000411809 REPIN1Q9BWE0 567 aaKnown RBP11.11□□□□□ -0.63
CLINT1-201ENST00000411809 LYRM2Q9NU23 88 aaPredicted RBP11.11□□□□□ -0.63
CLINT1-201ENST00000411809 RBMXL2O75526 392 aaKnown RBP11.1□□□□□ -0.63
CLINT1-201ENST00000411809 COX5BP10606 129 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 GDF1P27539 372 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 PKIAP61925 76 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 BEND4Q6ZU67 534 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 LILRB2Q8N423 598 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 LRTM2Q8N967 370 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 HES7Q9BYE0 225 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 IL36RNQ9UBH0 155 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 PRR14LQ5THK1 2151 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 HSPB1P04792 205 aaKnown RBP11.1□□□□□ -0.63
CLINT1-201ENST00000411809 FUT6P51993 359 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 SSTP61278 116 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 ERVS71-1P61550 626 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 SRSF7Q16629 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
CLINT1-201ENST00000411809 TGIF2LXQ8IUE1 241 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 ODF3L1Q8IXM7 274 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 SELENOHQ8IZQ5 122 aaKnown RBP11.1□□□□□ -0.63
CLINT1-201ENST00000411809 HS3ST6Q96QI5 342 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 RIF1Q5UIP0 2472 aaKnown RBP11.1□□□□□ -0.63
CLINT1-201ENST00000411809 ST8SIA5O15466 376 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 CLN3Q13286 438 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 ZNF506Q5JVG8 444 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 ZNF787Q6DD87 383 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 IL1F10Q8WWZ1 152 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 LURAP1Q96LR2 239 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 TTTY12Q9BZ98 90 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 STRADBQ9C0K7 418 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 BOKQ9UMX3 212 aaPredicted RBP11.1□□□□□ -0.63
CLINT1-201ENST00000411809 DOCK11Q5JSL3 2073 aa11.1□□□□□ -0.63
CLINT1-201ENST00000411809 CLDN34H7C241 214 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 IFNL4K9M1U5 179 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 SLC31A2O15432 143 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 LPAL2Q16609 132 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 WASF3Q9UPY6 502 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 A0A087WWC5 75 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 A0A0U1RQK1 487 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 PDCD6O75340 191 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 TRAPPC6AO75865 159 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 METTL15P1P0C7V9 234 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 G0S2P27469 103 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 TESK1Q15569 626 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 DCAF10Q5QP82 559 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 RPUSD4Q96CM3 377 aaKnown RBP11.09□□□□□ -0.63
CLINT1-201ENST00000411809 GNPNAT1Q96EK6 184 aaPredicted RBP11.09□□□□□ -0.63
CLINT1-201ENST00000411809 LAMP3Q9UQV4 416 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 TRAV39A0A0B4J263 110 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 CDS2O95674 445 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 IFNA5P01569 189 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 TK1P04183 234 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 CASP6P55212 293 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 FOXG1P55316 489 aaPredicted RBP11.09□□□□□ -0.63
CLINT1-201ENST00000411809 RBM11P57052 281 aaKnown RBP11.09□□□□□ -0.63
CLINT1-201ENST00000411809 ZNF611Q8N823 705 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 OR1K1Q8NGR3 316 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 TMEM37Q8WXS4 190 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 EXTL1Q92935 676 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 PRRG4Q9BZD6 226 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 PLA2G3Q9NZ20 509 aa11.09□□□□□ -0.63
CLINT1-201ENST00000411809 A0A0G2JRQ6 117 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 ZNF816-ZNF321PA0A0X1KG74 233 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 A0A1B0GW64 132 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 IFNA10P01566 189 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 RTP5Q14D33 572 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A2PQ658T7 463 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 SSX7Q7RTT5 188 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 SLC35E3Q7Z769 313 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 SPIN2AQ99865 258 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 SPIN2BQ9BPZ2 258 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A10PA6NDY2 464 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A18PA6NE21 464 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A16PA6NEW6 464 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A20PA6NIJ5 464 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A8PA6NJQ4 464 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A7PA6NKC0 464 aa11.08□□□□□ -0.64
CLINT1-201ENST00000411809 FAM90A22PA8MWA6 464 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms