RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 OR12D1P0DN82 309 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 CD36P16671 472 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 PSMB3P49720 205 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 GZMMP51124 257 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 ARPC4P59998 168 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 HIST1H3AP68431 136 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 H3F3AP84243 136 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 PRDX4Q13162 271 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 LPAL2Q16609 132 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 MOGQ16653 247 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 ABCA11PQ4W5N1 156 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 HIST2H3AQ71DI3 136 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 GLT6D1Q7Z4J2 308 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 ATP5L2Q7Z4Y8 100 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 TBC1D19Q8N5T2 526 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 ZNF676Q8N7Q3 588 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.31□□□□□ -1.88
LSM5-205ENST00000409952 OR2Z1Q8NG97 314 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 OR8A1Q8NGG7 326 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 OR4X1Q8NH49 305 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 APOBEC3DQ96AK3 386 aaPredicted RBP3.31□□□□□ -1.88
LSM5-205ENST00000409952 GALMQ96C23 342 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 HOPXQ9BPY8 73 aaPredicted RBP3.31□□□□□ -1.88
LSM5-205ENST00000409952 PYGO2Q9BRQ0 406 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 TMEM109Q9BVC6 243 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 GTSF1LQ9H1H1 148 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 TRABDQ9H4I3 376 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 SLC7A10Q9NS82 523 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 DOK5Q9P104 306 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 VPREB3Q9UKI3 123 aa3.31□□□□□ -1.88
LSM5-205ENST00000409952 SIGLEC1Q9BZZ2 1709 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 PCF11O94913 1555 aaKnown RBP3.3□□□□□ -1.88
LSM5-205ENST00000409952 THOC2Q8NI27 1593 aaKnown RBP3.3□□□□□ -1.88
LSM5-205ENST00000409952 NCOA1Q15788 1441 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 IGHV1-45A0A0A0MS14 117 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 TRAV8-1A0A0A6YYK1 113 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 PQLC2LA1A4F0 135 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 EEF1E1-BLOC1S5C9J1V9 151 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 H3BSA7 217 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 EEF1E1O43324 174 aaKnown RBP3.3□□□□□ -1.88
LSM5-205ENST00000409952 LY6G6DO95868 133 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 CXorf1O96002 111 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 OR13C7P0DN81 318 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 VEGFCP49767 419 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 CMC4P56277 68 aaPredicted RBP3.3□□□□□ -1.88
LSM5-205ENST00000409952 PYCR3Q53H96 274 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 MRPL2Q5T653 305 aaKnown RBP3.3□□□□□ -1.88
LSM5-205ENST00000409952 TRIQKQ629K1 86 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 FAM71E1Q6IPT2 247 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 ALKAL1Q6UXT8 129 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 TCF23Q7RTU1 214 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 DPPA2Q7Z7J5 298 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 C11orf42Q8N5U0 333 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 TMEM75Q8N9X5 138 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 OR2K2Q8NGT1 345 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 ANKRD36BP1Q96IX9 119 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 MED18Q9BUE0 208 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 KIFC1Q9BW19 673 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 ZNF222Q9UK12 451 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 HHLA2Q9UM44 414 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 TMEM14AQ9Y6G1 99 aa3.3□□□□□ -1.88
LSM5-205ENST00000409952 KIF15Q9NS87 1388 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 A0A1B0GV50 99 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 STK16O75716 305 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 POP7O75817 140 aaKnown RBP3.29□□□□□ -1.88
LSM5-205ENST00000409952 OR7C1O76099 320 aaPredicted RBP3.29□□□□□ -1.88
LSM5-205ENST00000409952 CNTFRP26992 372 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 HSPA9P38646 679 aaKnown RBP3.29□□□□□ -1.88
LSM5-205ENST00000409952 RPS10P46783 165 aaKnown RBP3.29□□□□□ -1.88
LSM5-205ENST00000409952 CXCL12P48061 93 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 NUDT2P50583 147 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 CTBP2P56545 445 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 GABARAPL2P60520 117 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 PSME3P61289 254 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 PSG4Q00888 419 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 CDK10Q15131 360 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 ALX1Q15699 326 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 MPPED2Q15777 294 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 LUZP6Q538Z0 58 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 FAM201AQ5SY85 155 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 C1orf194Q5T5A4 169 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 ZNF567Q8N184 647 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 UBL4BQ8N7F7 174 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 YIPF7Q8N8F6 280 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 CIRBP-AS1Q8TBR5 109 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 C2orf15Q8WU43 125 aaKnown RBP3.29□□□□□ -1.88
LSM5-205ENST00000409952 REEP6Q96HR9 211 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 CMSS1Q9BQ75 279 aaKnown RBP3.29□□□□□ -1.88
LSM5-205ENST00000409952 TBL1YQ9BQ87 522 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 MS4A8Q9BY19 250 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 ARMC1Q9NVT9 282 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 ENOPH1Q9UHY7 261 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 CARHSP1Q9Y2V2 147 aaKnown RBP3.29□□□□□ -1.88
LSM5-205ENST00000409952 VWA8A3KMH1 1905 aa3.29□□□□□ -1.88
LSM5-205ENST00000409952 SCN2AQ99250 2005 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 LOC105371267A0A1B0GV96 52 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 GNG14A0A1W2PPG7 69 aa3.28□□□□□ -1.88
LSM5-205ENST00000409952 GMNCA6NCL1 334 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms