RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 ID3Q02535 119 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 NHLH2Q02577 135 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 C22orf34Q6ZV56 151 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 BPIFCQ8NFQ6 507 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 OR8U1Q8NH10 309 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 OR1L1Q8NH94 360 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 TMEM171Q8WVE6 324 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 GALMQ96C23 342 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 PLA2G2EQ9NZK7 142 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 PPP1R3CQ9UQK1 317 aa16.89■□□□□ 0.29
USP39-204ENST00000409766 RBM7Q9Y580 266 aaKnown RBP16.89■□□□□ 0.29
USP39-204ENST00000409766 FBXO24O75426 580 aa16.88■□□□□ 0.29
USP39-204ENST00000409766 CISD2Q8N5K1 135 aaKnown RBP16.88■□□□□ 0.29
USP39-204ENST00000409766 OR2C3Q8N628 320 aa16.88■□□□□ 0.29
USP39-204ENST00000409766 CD177Q8N6Q3 437 aa16.88■□□□□ 0.29
USP39-204ENST00000409766 ARL11Q969Q4 196 aa16.88■□□□□ 0.29
USP39-204ENST00000409766 IGLV3-9A0A075B6K5 115 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 A0A0G2JRQ6 117 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 SRRM5B3KS81 715 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 PRRG2O14669 202 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 CFHR2P36980 270 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 TBR1Q16650 682 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 OR10Z1Q8NGY1 313 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 KCNS2Q9ULS6 477 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 TMA7Q9Y2S6 64 aaKnown RBP16.87■□□□□ 0.29
USP39-204ENST00000409766 ZGRF1Q86YA3 2104 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 CEP295Q9C0D2 2601 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 NUDT19A8MXV4 375 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 SSSCA1O60232 199 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 PITX3O75364 302 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 IGKV1-39P01597 117 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 IGKV1D-39P04432 117 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 EGR1P18146 543 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 PVALBP20472 110 aaPredicted RBP16.87■□□□□ 0.29
USP39-204ENST00000409766 GABRA2P47869 451 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 EWSR1Q01844 656 aaKnown RBP eCLIP16.87■□□□□ 0.29
USP39-204ENST00000409766 PAX5Q02548 391 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 KRBOX4Q5JUW0 171 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 C1QTNF12Q5T7M4 302 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 DRAM1Q8N682 238 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 TOLLIPQ9H0E2 274 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 MAGT1Q9H0U3 335 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 MMP26Q9NRE1 261 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 CACNA1DQ01668 2161 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 PIEZO2Q9H5I5 2752 aa16.87■□□□□ 0.29
USP39-204ENST00000409766 BORCS7-ASMTA0A0B4J1R7 106 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 A0A0G2JNJ9 132 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 ATP6V1G2-DDX39BF2Z307 99 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 HBZP02008 142 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 SLC25A6P12236 298 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 PRDX2P32119 198 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 GLIPR1P48060 266 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 PXDC1Q5TGL8 231 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 VHLLQ6RSH7 139 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 SUN5Q8TC36 379 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 GPR146Q96CH1 333 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 LYRM2Q9NU23 88 aaPredicted RBP16.86■□□□□ 0.29
USP39-204ENST00000409766 Q9UFV3 132 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 A0A1B0GU03 582 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 FAM24AA6NFZ4 105 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 K7ENP7 123 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 IL2RGP31785 369 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 LPAR6P43657 344 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 SPRNQ5BIV9 151 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 FAM209AQ5JX71 171 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 MRGPRGQ86SM5 289 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 MRGPRDQ8TDS7 321 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 OR2V2Q96R30 315 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 GINS3Q9BRX5 216 aa16.86■□□□□ 0.29
USP39-204ENST00000409766 IGSF23A1L1A6 192 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 MED6O75586 246 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 TMEM50AO95807 157 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 MMP9P14780 707 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 CCKARP32238 428 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 CAV2P51636 162 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 ZNF585BQ52M93 769 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 FAM90A1Q86YD7 464 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 GCSAMQ8N6F7 178 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 OR52L2PQ8NGH6 319 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 MEGF10Q96KG7 1140 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 LURAP1Q96LR2 239 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 PLEKHF2Q9H8W4 249 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 LIN7CQ9NUP9 197 aaKnown RBP16.85■□□□□ 0.29
USP39-204ENST00000409766 RNF115Q9Y4L5 304 aa16.85■□□□□ 0.29
USP39-204ENST00000409766 IGKV1D-17A0A075B6S4 117 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 ZNF737O75373 536 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 FAM53AQ6NSI3 398 aaPredicted RBP16.84■□□□□ 0.29
USP39-204ENST00000409766 IL34Q6ZMJ4 242 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 ZNF645Q8N7E2 425 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 TPRX1Q8N7U7 411 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 OR13A1Q8NGR1 328 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 LSM10Q969L4 123 aaKnown RBP16.84■□□□□ 0.29
USP39-204ENST00000409766 SEBOXQ9HB31 216 aaPredicted RBP16.84■□□□□ 0.29
USP39-204ENST00000409766 MSRB2Q9Y3D2 182 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 B8ZZF3 427 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 SEC11BP0C7V7 166 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 RPS23P62266 143 aaKnown RBP16.84■□□□□ 0.29
USP39-204ENST00000409766 TMEM252Q8N6L7 170 aa16.84■□□□□ 0.29
USP39-204ENST00000409766 MS4A7Q9GZW8 240 aaPredicted RBP16.84■□□□□ 0.29
USP39-204ENST00000409766 HRH4Q9H3N8 390 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms