RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 FSTP19883 344 aa21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 CLEC9AQ6UXN8 241 aa21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 TMEM91Q6ZNR0 172 aa21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 SMPD2O60906 423 aa21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 RPL27AP46776 148 aaKnown RBP21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 LYZL2Q7Z4W2 148 aa21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 IGLV3-21P80748 117 aaPredicted RBP21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 ZNF66Q6ZN08 573 aa21.69■■□□□ 1.06
SPIRE1-202ENST00000409402 FCN1O00602 326 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 EFNB2P52799 333 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 WDR73Q6P4I2 378 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 ZNF826PQ6ZT77 177 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 C16orf82Q7Z2V1 217 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 IGSF23A1L1A6 192 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 B2MP61769 119 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 IGHV3-21A0A0B4J1V1 117 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 LEUTXA8MZ59 168 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 COX5BP10606 129 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 MOGAT2Q3SYC2 334 aa21.68■■□□□ 1.06
SPIRE1-202ENST00000409402 C11orf94C9JXX5 98 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 ZNHIT1O43257 154 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 CALHM1Q8IU99 346 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 HIGD1AQ9Y241 93 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 WASHC3Q9Y3C0 194 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 KIAA1324LA8MWY0 1029 aaPredicted RBP21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 PF4V1P10720 104 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 PKIBQ9C010 78 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 V9GYH0 126 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 RPL13AP40429 203 aaKnown RBP21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 TIMP4Q99727 224 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 METTL1Q9UBP6 276 aaKnown RBP21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 CYB5R3P00387 301 aaPredicted RBP21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 PRSS53Q2L4Q9 553 aa21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 ADAD2Q8NCV1 583 aaKnown RBP21.67■■□□□ 1.06
SPIRE1-202ENST00000409402 RBFOX3A6NFN3 312 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 SYNGR3O43761 229 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 C1QCP02747 245 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 FABP4P15090 132 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 IGLV1-36A0A0B4J1U3 117 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 P01737 135 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 CAMPP49913 170 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 EWSR1Q01844 656 aaKnown RBP eCLIP21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 KLF14Q8TD94 323 aaPredicted RBP21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 PITPNC1Q9UKF7 332 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 TMEM37Q8WXS4 190 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 CTHRC1Q96CG8 243 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 MIXL1Q9H2W2 232 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 GHITMQ9H3K2 345 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 NAT8Q9UHE5 227 aa21.66■■□□□ 1.06
SPIRE1-202ENST00000409402 PPIAL4CA0A0B4J2A2 164 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 PPIAL4GP0DN37 164 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 HIST1H3AP68431 136 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 ROM1Q03395 351 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 IGF2P01344 180 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 IGHV3-72A0A0B4J1Y9 119 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 IGLV3-19P01714 112 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 IDI2-AS1Q9NZ38 188 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 TEX50A0A1B0GTY4 177 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A10PA6NDY2 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A18PA6NE21 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A16PA6NEW6 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A20PA6NIJ5 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A8PA6NJQ4 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A7PA6NKC0 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A22PA8MWA6 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A12PA8MX19 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A5PA8MXJ8 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A23PA8MXZ1 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 B9A039 149 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A15PP0C7V4 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A13PP0C7W8 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A14PP0C7W9 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 FAM90A24PP0C7X0 464 aa21.65■■□□□ 1.06
SPIRE1-202ENST00000409402 KLF9Q13886 244 aaPredicted RBP21.64■■□□□ 1.06
SPIRE1-202ENST00000409402 KLK13Q9UKR3 277 aa21.64■■□□□ 1.06
SPIRE1-202ENST00000409402 ZP3P21754 424 aa21.64■■□□□ 1.06
SPIRE1-202ENST00000409402 COL8A1P27658 744 aa21.64■■□□□ 1.06
SPIRE1-202ENST00000409402 NHLH1Q02575 133 aa21.64■■□□□ 1.06
SPIRE1-202ENST00000409402 NHLH2Q02577 135 aa21.64■■□□□ 1.06
SPIRE1-202ENST00000409402 RFLNBQ8N5W9 214 aa21.64■■□□□ 1.06
SPIRE1-202ENST00000409402 TMEM105Q8N8V8 129 aa21.64■■□□□ 1.05
SPIRE1-202ENST00000409402 OR5AL1P0C617 328 aa21.64■■□□□ 1.05
SPIRE1-202ENST00000409402 RCC2Q9P258 522 aaKnown RBP21.64■■□□□ 1.05
SPIRE1-202ENST00000409402 WDR90Q96KV7 1748 aa21.64■■□□□ 1.05
SPIRE1-202ENST00000409402 MUC15Q8N387 334 aa21.64■■□□□ 1.05
SPIRE1-202ENST00000409402 LOC105371242A0A075B767 164 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 IGHV1-69-2A0A0G2JMI3 117 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 PRDM14Q9GZV8 571 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 TMEM229AB2RXF0 380 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 RGS13O14921 159 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 CXorf1O96002 111 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 ZNF645Q8N7E2 425 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 LINC01560Q8TB33 94 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 LHFPL6Q9Y693 200 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 NUBP1P53384 320 aa21.63■■□□□ 1.05
SPIRE1-202ENST00000409402 FAM157CP0CG43 387 aa21.62■■□□□ 1.05
SPIRE1-202ENST00000409402 RANP62826 216 aaKnown RBP21.62■■□□□ 1.05
SPIRE1-202ENST00000409402 IZUMO4Q1ZYL8 232 aa21.62■■□□□ 1.05
SPIRE1-202ENST00000409402 ABHD14BQ96IU4 210 aa21.62■■□□□ 1.05
SPIRE1-202ENST00000409402 MIA3Q5JRA6 1907 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms