RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 FABP6P51161 128 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 NUBP1P53384 320 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 UBE2NP61088 152 aaKnown RBP6.4□□□□□ -1.38
HDAC9-202ENST00000405010 SPINK9Q5DT21 86 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 STUMQ69YW2 141 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.4□□□□□ -1.38
HDAC9-202ENST00000405010 OR1L6Q8NGR2 347 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 GPR146Q96CH1 333 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 TM2D1Q9BX74 207 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 WIPI2Q9Y4P8 454 aa6.4□□□□□ -1.38
HDAC9-202ENST00000405010 DIDO1Q9BTC0 2240 aaKnown RBP6.4□□□□□ -1.39
HDAC9-202ENST00000405010 LOC102724200A0A096LPH7 203 aaPredicted RBP6.4□□□□□ -1.39
HDAC9-202ENST00000405010 PDE6DO43924 150 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 THBS3P49746 956 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 HINT1P49773 126 aaPredicted RBP6.4□□□□□ -1.39
HDAC9-202ENST00000405010 TCL1AP56279 114 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 DMWDQ09019 674 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 SLC25A47Q6Q0C1 308 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 BTNL3Q6UXE8 466 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 RNF144BQ7Z419 303 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 ABHD5Q8WTS1 349 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 UQCR10Q9UDW1 63 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 OR2W1Q9Y3N9 320 aa6.4□□□□□ -1.39
HDAC9-202ENST00000405010 IGKV1-9A0A0C4DH69 117 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 H0Y980 276 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RPL36A-HNRNPH2H7BZ11 118 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 PRDX4Q13162 271 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RPEL1Q2QD12 228 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 FAM89BQ8N5H3 189 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 OR5B3Q8NH48 314 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 TMEM170AQ8WVE7 144 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 ZCCHC14Q8WYQ9 949 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 KLHDC3Q9BQ90 382 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 WDR61Q9GZS3 305 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 OBP2BQ9NPH6 170 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 ASXL3Q9C0F0 2248 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 A0A1W2PPC4 97 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 SHISA7A6NL88 538 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 PPIHO43447 177 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 GRPP07492 148 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 OR5G3P0C626 314 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 GABRG2P18507 467 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 SPINK2P20155 84 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 BRS3P32247 399 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 CEACAM6P40199 344 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 KIR2DL1P43626 348 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 CCR5P51681 352 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 FOXL2P58012 376 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 QRFPP83859 136 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RSPO4Q2I0M5 234 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 SPATA45Q537H7 98 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 WDR73Q6P4I2 378 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RPS19BP1Q86WX3 136 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 MSI2Q96DH6 328 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 DAZAP1Q96EP5 407 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RTN4RQ9BZR6 473 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 OR2J1Q9GZK6 312 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 TMEM242Q9NWH2 141 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 MMP17Q9ULZ9 603 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RPH3ALQ9UNE2 315 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 TRAV39A0A0B4J263 110 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 NPIPB13A6NJU9 1138 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 NPIPB4C9JG80 1138 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 CFIP05156 583 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 EGR1P18146 543 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 GCH1P30793 250 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 TFF2Q03403 129 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 FNDC7Q5VTL7 733 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 OR5D13Q8NGL4 314 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 PPP1R35Q8TAP8 253 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 C22orf15Q8WYQ4 148 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 SCARF2Q96GP6 870 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 PSMG3Q9BT73 122 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 OR6C3Q9NZP0 311 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 CEACAM18A8MTB9 384 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 MKRN2OSH3BPM6 223 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 OR4A8P0C604 315 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 CD99P14209 185 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 WNT5AP41221 380 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 GNG4P50150 75 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RPL23P62829 140 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 RNASEKQ6P5S7 137 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 ZNF818PQ6ZRF7 136 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 DMRTC2Q8IXT2 367 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 ARL6IP6Q8N6S5 226 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 C18orf12Q96KH6 178 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 ZNF385AQ96PM9 386 aaKnown RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 CDCA3Q99618 268 aaPredicted RBP6.39□□□□□ -1.39
HDAC9-202ENST00000405010 MIEN1Q9BRT3 115 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 ZNF319Q9P2F9 582 aa6.39□□□□□ -1.39
HDAC9-202ENST00000405010 TCF20Q9UGU0 1960 aaKnown RBP6.38□□□□□ -1.39
HDAC9-202ENST00000405010 ACTL6BO94805 426 aa6.38□□□□□ -1.39
HDAC9-202ENST00000405010 BCL3P20749 454 aa6.38□□□□□ -1.39
HDAC9-202ENST00000405010 CSRP1P21291 193 aaKnown RBP6.38□□□□□ -1.39
HDAC9-202ENST00000405010 LCN2P80188 198 aa6.38□□□□□ -1.39
HDAC9-202ENST00000405010 CRIPAKQ8N1N5 446 aa6.38□□□□□ -1.39
HDAC9-202ENST00000405010 UCN2Q96RP3 112 aa6.38□□□□□ -1.39
HDAC9-202ENST00000405010 GABRG3Q99928 467 aa6.38□□□□□ -1.39
HDAC9-202ENST00000405010 TMEM204Q9BSN7 226 aa6.38□□□□□ -1.39
HDAC9-202ENST00000405010 TMEM208Q9BTX3 173 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms