RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FXYD6Q9H0Q3 95 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 FAM234AQ9H0X4 552 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 C19orf12Q9NSK7 152 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 PRR13Q9NZ81 148 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 KCNS2Q9ULS6 477 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 OR2W1Q9Y3N9 320 aa3.08□□□□□ -1.92
RTN4-208ENST00000404909 RAI1Q7Z5J4 1906 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 APCP25054 2843 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ITPR2Q14571 2701 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 hADV38S2A0JD32 116 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 HMX3A6NHT5 357 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 NDUFA2O43678 99 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 FCN3O75636 299 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 IGHV2-70P01814 119 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CXCL3P19876 107 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 GPR6P46095 362 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 TMEM33P57088 247 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 TMEM128Q5BJH2 165 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF626Q68DY1 528 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 NLRC3Q7RTR2 1065 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZFAND1Q8TCF1 268 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CHAC2Q8WUX2 184 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 LEAP2Q969E1 77 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 LURAP1Q96LR2 239 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CABLES2Q9BTV7 478 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 SEBOXQ9HB31 216 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 CCL28Q9NRJ3 127 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 SLC2A9Q9NRM0 540 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CALYQ9NYX4 217 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF221Q9UK13 617 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 UNC79Q9P2D8 2635 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 A0A1W2PPE3 182 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 C9orf170A2RU37 121 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 POM121CA8CG34 1229 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 FAM25EA8MYX2 175 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 BOLA2-SMG1P6H3BVE0 249 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 PHF1O43189 567 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 IGHV4-39P01824 125 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 IL5P05113 134 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 HEXAP06865 529 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CTSDP07339 412 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 CCL3L1P16619 93 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CD34P28906 385 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 GNRHRP30968 328 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ECI1P42126 302 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 LUMP51884 338 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 ATP5J2P56134 94 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 TAS2R31P59538 309 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 MRPS11P82912 194 aaKnown RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF273Q14593 569 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 SURF2Q15527 256 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 SP6Q3SY56 376 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF787Q6DD87 383 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 HIST2H2BCQ6DN03 193 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF818PQ6ZRF7 136 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 SGPP2Q8IWX5 399 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 H1FOOQ8IZA3 346 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 SLC38A6Q8IZM9 456 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF431Q8TF32 576 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 RTN4IP1Q8WWV3 396 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 TMEM230Q96A57 120 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 PERPQ96FX8 193 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 FYTTD1Q96QD9 318 aaKnown RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 CHIAQ9BZP6 476 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ALX4Q9H161 411 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 RANGRFQ9HD47 186 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 MGAT4CQ9UBM8 478 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CLN8Q9UBY8 286 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 FLNBO75369 2602 aaKnown RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 TLN2Q9Y4G6 2542 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.07□□□□□ -1.923e-9■■■■■ 96.9
RTN4-208ENST00000404909 CSPG4Q6UVK1 2322 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 KBTBD11-OT1A0A1B0GTJ5 212 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 SNRPGP15A8MWD9 76 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 C15orf65H3BRN8 121 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 OVOL3O00110 214 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 GOSR2O14653 212 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 TNFRSF13BO14836 293 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 ST8SIA5O15466 376 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 TUSC2O75896 110 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 GOSR1O95249 250 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 SIX6O95475 246 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF16P17020 682 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 ERP29P30040 261 aaKnown RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 MECP2P51608 486 aaKnown RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 PAX5Q02548 391 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 PRAMEF5Q5TYX0 476 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 TMEM200BQ69YZ2 307 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 TRAT1Q6PIZ9 186 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CLEC18BQ6UXF7 455 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 LYG2Q86SG7 212 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 LDLRAD3Q86YD5 345 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 CMTM1Q8IZ96 169 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 ZNF295-AS1Q8N0V1 137 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 C12orf45Q8N5I9 185 aaPredicted RBP3.07□□□□□ -1.92
RTN4-208ENST00000404909 SPICQ8N5J4 248 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 OR11H7Q8NGC8 314 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 OR8B3Q8NGG8 313 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 OR8B2Q96RD0 313 aa3.07□□□□□ -1.92
RTN4-208ENST00000404909 OR2D2Q9H210 308 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms