RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 FAM216BQ8N7L0 139 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 TPRX1Q8N7U7 411 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 UXS1Q8NBZ7 420 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 COQ8AQ8NI60 647 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 ASB13Q8WXK3 278 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 ARL11Q969Q4 196 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 FOXC2Q99958 501 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 ZNF436Q9C0F3 470 aaPredicted RBP17.45■□□□□ 0.38
TPM1-208ENST00000404484 SLC5A7Q9GZV3 580 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 KAAG1Q9UBP8 84 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 SHPKQ9UHJ6 478 aa17.45■□□□□ 0.38
TPM1-208ENST00000404484 F8P00451 2351 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 TEX13DA0A0J9YY54 714 aaPredicted RBP17.44■□□□□ 0.38
TPM1-208ENST00000404484 CRYM-AS1A6NIL9 109 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 HEXAP06865 529 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 SELLP14151 372 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 CXCL3P19876 107 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 EIF2B2P49770 351 aaKnown RBP17.44■□□□□ 0.38
TPM1-208ENST00000404484 HTD2P86397 168 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 ZFP69Q49AA0 526 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 C5orf24Q7Z6I8 188 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 OR1L1Q8NH94 360 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 SECTM1Q8WVN6 248 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 SLC2A9Q9NRM0 540 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 OR1A1Q9P1Q5 309 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 SLC25A10Q9UBX3 287 aaPredicted RBP17.44■□□□□ 0.38
TPM1-208ENST00000404484 LPAR3Q9UBY5 353 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 KCNIP3Q9Y2W7 256 aa17.44■□□□□ 0.38
TPM1-208ENST00000404484 RAI1Q7Z5J4 1906 aaPredicted RBP17.44■□□□□ 0.38
TPM1-208ENST00000404484 HIVEP1P15822 2718 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 TRGV10A0A0A0MS01 117 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 ADAM20O43506 726 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 NDUFB3O43676 98 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 IFNA2P01563 188 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 LUMP51884 338 aaPredicted RBP17.43■□□□□ 0.38
TPM1-208ENST00000404484 LRRC10Q5BKY1 277 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 LIN54Q6MZP7 749 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 OR10V1Q8NGI7 309 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 CASTOR1Q8WTX7 329 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 FAM216AQ8WUB2 273 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 FYTTD1Q96QD9 318 aaKnown RBP17.43■□□□□ 0.38
TPM1-208ENST00000404484 TOLLIPQ9H0E2 274 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 RDH8Q9NYR8 311 aa17.43■□□□□ 0.38
TPM1-208ENST00000404484 GPR31O00270 319 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 TNFRSF13BO14836 293 aaPredicted RBP17.42■□□□□ 0.38
TPM1-208ENST00000404484 RP2O75695 350 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 SLC22A5O76082 557 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 GIPP09681 153 aaPredicted RBP17.42■□□□□ 0.38
TPM1-208ENST00000404484 CEACAM6P40199 344 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 RND3P61587 244 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 MEF2CQ06413 473 aaPredicted RBP17.42■□□□□ 0.38
TPM1-208ENST00000404484 TMEM30BQ3MIR4 351 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 CMTM1Q8IZ96 169 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 RTN4IP1Q8WWV3 396 aaPredicted RBP17.42■□□□□ 0.38
TPM1-208ENST00000404484 TIMD4Q96H15 378 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 CCL19Q99731 98 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 TMEM246Q9BRR3 403 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 NAA60Q9H7X0 242 aa17.42■□□□□ 0.38
TPM1-208ENST00000404484 A0A1B0GW55 424 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 hADV38S2A0JD32 116 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 C15orf65H3BRN8 121 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 GOSR2O14653 212 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4L2P0CJ85 424 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4L3P0CJ86 424 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4L4P0CJ87 422 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4L5P0CJ88 424 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4L6P0CJ89 424 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4L7P0CJ90 424 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 RPS2P15880 293 aaKnown RBP17.41■□□□□ 0.38
TPM1-208ENST00000404484 COL8A2P25067 703 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 SSTR5P35346 364 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 SUPT4H1P63272 117 aaKnown RBP17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4L9Q6RFH8 374 aaPredicted RBP17.41■□□□□ 0.38
TPM1-208ENST00000404484 IGFBPL1Q8WX77 278 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 DUX4Q9UBX2 424 aa17.41■□□□□ 0.38
TPM1-208ENST00000404484 RBM7Q9Y580 266 aaKnown RBP17.41■□□□□ 0.38
TPM1-208ENST00000404484 TEP1Q99973 2627 aaKnown RBP17.41■□□□□ 0.38
TPM1-208ENST00000404484 ZNF469Q96JG9 3925 aaPredicted RBP17.41■□□□□ 0.38
TPM1-208ENST00000404484 IGKV1D-13A0A0B4J2D9 117 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 IGKV1-13P0DP09 117 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 DAOP14920 347 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 NDUFB7P17568 137 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 HLA-GP17693 338 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 GNRHRP30968 328 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 RAP2BP61225 183 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 C11orf91Q3C1V1 193 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 PHLDA2Q53GA4 152 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 SPNS3Q6ZMD2 512 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 LURAP1LQ8IV03 231 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 UBALD1Q8TB05 177 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 CORO2AQ92828 525 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 RAB1CQ92928 201 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 GALNT14Q96FL9 552 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 DMRTB1Q96MA1 342 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 BEX4Q9NWD9 120 aaPredicted RBP17.4■□□□□ 0.38
TPM1-208ENST00000404484 JPT1Q9UK76 154 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 KIAA2026Q5HYC2 2103 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 IGHV2-70P01814 119 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 C1QBP02746 253 aa17.4■□□□□ 0.38
TPM1-208ENST00000404484 SLC9A3R2Q15599 337 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms