RNA–Protein interactions for RNA: ENST00000404210.5

LINC00339-201, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 1,189 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-201ENST00000404210 ANKRD20A5PA0PJZ0 165 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF736B4DX44 427 aaPredicted RBP10.07□□□□□ -0.8
LINC00339-201ENST00000404210 RGS11O94810 467 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 CD74P04233 296 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 FCER2P06734 321 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 TBPP20226 339 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 NFYBP25208 207 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 HLA-DMAP28067 261 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 CEACAM6P40199 344 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 AP3S2P59780 193 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 CDK10Q15131 360 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 LTC4SQ16873 150 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 ACTBL2Q562R1 376 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 NCR3LG1Q68D85 454 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 OVCH2Q7RTZ1 564 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 TOMM5Q8N4H5 51 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 OR52L2PQ8NGH6 319 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 OR5H2Q8NGV7 314 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 OR10J5Q8NHC4 309 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 IL1F10Q8WWZ1 152 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 DEDD2Q8WXF8 326 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 TRIM63Q969Q1 353 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 GNG12Q9UBI6 72 aa10.07□□□□□ -0.8
LINC00339-201ENST00000404210 IGHV3-43A0A0B4J1X8 118 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 ITGB1BP1O14713 200 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 BET1O15155 118 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 HSPA12AO43301 675 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 AVPP01185 164 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 PMP2P02689 132 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 CD3DP04234 171 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 OR5H8P0DN80 308 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 IGHV3-43DP0DP04 118 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 RFX2P48378 723 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 UBE2E1P51965 193 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 PRRX1P54821 245 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 DYRK1AQ13627 763 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 VAX1Q5SQQ9 334 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 TRIQKQ629K1 86 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 HCP5Q6MZN7 132 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 STEAP1BQ6NZ63 245 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 DHRS11Q6UWP2 260 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF782Q6ZMW2 699 aaPredicted RBP10.06□□□□□ -0.8
LINC00339-201ENST00000404210 ABHD12Q8N2K0 398 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 LINC00311Q8N616 119 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 TEX29Q8N6K0 151 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 C8orf31Q8N9H6 132 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 OR11H6Q8NGC7 330 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 OR9G1Q8NH87 305 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF596Q8TC21 504 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 GIMAP1Q8WWP7 306 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 SUCNR1Q9BXA5 334 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 CLEC7AQ9BXN2 247 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 SIRT7Q9NRC8 400 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 TMEM160Q9NX00 188 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 SLC23A1Q9UHI7 598 aa10.06□□□□□ -0.8
LINC00339-201ENST00000404210 ITPR3Q14573 2671 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 IGHV2-26A0A0B4J1V2 119 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 CENPVL3A0A0U1RRI6 287 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 A8MV72 311 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-201ENST00000404210 J3QR06 171 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 J3QRK9 145 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 RAB3DO95716 219 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 LY6G6DO95868 133 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 AKAIN1P0CW23 69 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 IL7P13232 177 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 HOXB4P17483 251 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-201ENST00000404210 HRH1P35367 487 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 INPP1P49441 399 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 BPIFB3P59826 476 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 KLF9Q13886 244 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-201ENST00000404210 MEF2DQ14814 521 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 RNASE10Q5GAN6 216 aaKnown RBP10.05□□□□□ -0.8
LINC00339-201ENST00000404210 C1orf229Q6ZS94 237 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-201ENST00000404210 H1FOOQ8IZA3 346 aaPredicted RBP10.05□□□□□ -0.8
LINC00339-201ENST00000404210 PNKDQ8N490 385 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 FAM216AQ8WUB2 273 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 EDARADDQ8WWZ3 215 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 GINS4Q9BRT9 223 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 YAE1D1Q9NRH1 226 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 EHFQ9NZC4 300 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 OR1A1Q9P1Q5 309 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 PSG11Q9UQ72 335 aa10.05□□□□□ -0.8
LINC00339-201ENST00000404210 AKAP9Q99996 3911 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 RNASEK-C17orf49H0YIS7 233 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 TOR1AO14656 332 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 TUSC2O75896 110 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 IFNA6P05013 189 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 FCGR2CP31995 323 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 PPP1CCP36873 323 aaKnown RBP10.04□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF134P52741 427 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 DLX1P56177 255 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 TSPAN5P62079 268 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 GNMTQ14749 295 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 UTF1Q5T230 341 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF57Q68EA5 555 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-201ENST00000404210 FAM53AQ6NSI3 398 aaPredicted RBP10.04□□□□□ -0.8
LINC00339-201ENST00000404210 TMEM17Q86X19 198 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 ZNF439Q8NDP4 499 aa10.04□□□□□ -0.8
LINC00339-201ENST00000404210 BEND2Q8NDZ0 799 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms