RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 HDHD3Q9BSH5 251 aaPredicted RBP7.5□□□□□ -1.21
VPS53-203ENST00000401468 C6orf62Q9GZU0 229 aaPredicted RBP7.5□□□□□ -1.21
VPS53-203ENST00000401468 SCPEP1Q9HB40 452 aa7.5□□□□□ -1.21
VPS53-203ENST00000401468 Q9N2K0 584 aa7.5□□□□□ -1.21
VPS53-203ENST00000401468 ELF5Q9UKW6 265 aaPredicted RBP7.5□□□□□ -1.21
VPS53-203ENST00000401468 AUP1Q9Y679 476 aa7.5□□□□□ -1.21
VPS53-203ENST00000401468 V9GYH0 126 aa7.5□□□□□ -1.21
VPS53-203ENST00000401468 TRGV10A0A0A0MS01 117 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 TMEM235A6NFC5 223 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 C12orf77C9JDV5 145 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 SULT1C2O00338 296 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 RGS5O15539 181 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 NAT1P18440 290 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 RCC1P18754 421 aaPredicted RBP7.49□□□□□ -1.21
VPS53-203ENST00000401468 PRTN3P24158 256 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 LOXL3P58215 753 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 UBA52P62987 128 aaKnown RBP7.49□□□□□ -1.21
VPS53-203ENST00000401468 HTD2P86397 168 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 Q3ZCU0 254 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 LY6G6FQ5SQ64 297 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 C6orf183Q5T699 404 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 HCP5Q6MZN7 132 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 BTNL3Q6UXE8 466 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 WFDC3Q8IUB2 231 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 C3orf56Q8N813 242 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 OR52M1Q8NGK5 317 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 NEK7Q8TDX7 302 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 GPX8Q8TED1 209 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 PHF21AQ96BD5 680 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 TBX15Q96SF7 602 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 TOLLIPQ9H0E2 274 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 GAL3ST2Q9H3Q3 398 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 METTL8Q9H825 291 aaKnown RBP7.49□□□□□ -1.21
VPS53-203ENST00000401468 ZMAT3Q9HA38 289 aaKnown RBP7.49□□□□□ -1.21
VPS53-203ENST00000401468 CALYQ9NYX4 217 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 EXTL2Q9UBQ6 330 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 WNK1Q9H4A3 2382 aa7.49□□□□□ -1.21
VPS53-203ENST00000401468 A0A1W2PQ09 198 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 MEIOCA2RUB1 952 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 FAM25AB3EWG3 89 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 FAM25CB3EWG5 89 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 FAM25GB3EWG6 89 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 TRIM77I1YAP6 450 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 GSTZ1O43708 216 aaPredicted RBP7.48□□□□□ -1.21
VPS53-203ENST00000401468 MMP23AO75900 390 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 LPLP06858 475 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 CD3GP09693 182 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 IGHV1-8P0DP01 117 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 CCL3L1P16619 93 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 PRSS3P35030 304 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 SSTR5P35346 364 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 TALDO1P37837 337 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 CBX5P45973 191 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 HLA-DRB3P79483 266 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 MRPS10P82664 201 aaKnown RBP7.48□□□□□ -1.21
VPS53-203ENST00000401468 SSBP1Q04837 148 aaKnown RBP7.48□□□□□ -1.21
VPS53-203ENST00000401468 SRSF4Q08170 494 aaKnown RBP7.48□□□□□ -1.21
VPS53-203ENST00000401468 AWAT1Q58HT5 328 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 PYHIN1Q6K0P9 492 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 HOGA1Q86XE5 327 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 FAM185AQ8N0U4 392 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 C8orf31Q8N9H6 132 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 OR4K15Q8NH41 348 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 ZNF596Q8TC21 504 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 MRGPRDQ8TDS7 321 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 NUDCD2Q8WVJ2 157 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 DIRAS2Q96HU8 199 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 KIRREL1Q96J84 757 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 PCGF1Q9BSM1 259 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 CABLES2Q9BTV7 478 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 SUCNR1Q9BXA5 334 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 TRAPPC2LQ9UL33 140 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 RBMX2Q9Y388 322 aaKnown RBP7.48□□□□□ -1.21
VPS53-203ENST00000401468 VWFP04275 2813 aa7.48□□□□□ -1.21
VPS53-203ENST00000401468 hCG_1809904A0A1W2PP81 198 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 A0A1W2PPE2 198 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 A0A1W2PR64 198 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 A0A1W2PRD5 423 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 A0A1W2PRF3 423 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 A0A1W2PRM7 423 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 A0A1W2PRV1 198 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 TRDCB7Z8K6 153 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 TOX4O94842 621 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 HBZP02008 142 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 PTHLHP12272 177 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 FPR2P25090 351 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 S100A5P33763 92 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 GDNFP39905 211 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 GLP1RP43220 463 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 KIR2DS4P43632 304 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 GNG2P59768 71 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 ERVFRD-1P60508 538 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 ARF6P62330 175 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 BAMBIQ13145 260 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 ARFRP1Q13795 201 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 KIR2DS1Q14954 304 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 HERPUD1Q15011 391 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 ZNF79Q15937 498 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 METTL11BQ5VVY1 283 aa7.47□□□□□ -1.21
VPS53-203ENST00000401468 HIST2H2BDQ6DRA6 164 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms