RNA–Protein interactions for RNA: ENST00000399127.5

COL25A1-202, Transcript of collagen type XXV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL25A1, Length 2,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-202ENST00000399127 GAPTQ8N292 157 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 RBMXL3Q8N7X1 1067 aaKnown RBP9.98□□□□□ -0.81
COL25A1-202ENST00000399127 MSI2Q96DH6 328 aaKnown RBP9.98□□□□□ -0.81
COL25A1-202ENST00000399127 ABHD17AQ96GS6 310 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 CNTNAP3BQ96NU0 1288 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 CLCC1Q96S66 551 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 SYT3Q9BQG1 590 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 ATG101Q9BSB4 218 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 SEC11CQ9BY50 192 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 CNTNAP3Q9BZ76 1288 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 PKIBQ9C010 78 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 PLK3Q9H4B4 646 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 C19orf12Q9NSK7 152 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 ATP23Q9Y6H3 246 aa9.98□□□□□ -0.81
COL25A1-202ENST00000399127 ADGRG4Q8IZF6 3080 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 KALRNO60229 2985 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 CECR9P0C854 216 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 LYL1P12980 280 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 COX5AP20674 150 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 NHLH2Q02577 135 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 GAMTQ14353 236 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 SAPCD1Q5SSQ6 148 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 ETV3LQ6ZN32 361 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 ZNF826PQ6ZT77 177 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 OR52M1Q8NGK5 317 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 STARD4Q96DR4 205 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 SMIM3Q9BZL3 60 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 ZNF71Q9NQZ8 489 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-202ENST00000399127 SIRT7Q9NRC8 400 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 OR14J1Q9UGF5 321 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 LRP5LA4QPB2 252 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 MPPED1O15442 326 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 NXPH2O95156 264 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 IGKV3-15P01624 115 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 MBPP02686 304 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-202ENST00000399127 TPT1P13693 172 aaKnown RBP9.97□□□□□ -0.81
COL25A1-202ENST00000399127 RAC2P15153 192 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 UCP3P55916 312 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 TMEM268Q5VZI3 342 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 SPNS3Q6ZMD2 512 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 Q6ZS92 163 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 TBC1D26Q86UD7 250 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 BAP18Q8IXM2 172 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 SLC35G3Q8N808 338 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 BSCL2Q96G97 398 aaPredicted RBP9.97□□□□□ -0.81
COL25A1-202ENST00000399127 KIRREL1Q96J84 757 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 AQP10Q96PS8 301 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 SLC5A7Q9GZV3 580 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 SPACA1Q9HBV2 294 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 MSL2Q9HCI7 577 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 CCL28Q9NRJ3 127 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 PROCRQ9UNN8 238 aa9.97□□□□□ -0.81
COL25A1-202ENST00000399127 ICE1Q9Y2F5 2266 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 KIR2DS1A0A191URI9 304 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 C3orf85A0A1B0GTC6 90 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 IFITM10A6NMD0 228 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 MLNRO43193 412 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 YIF1AO95070 293 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 OR2H2O95918 312 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 TFF1P04155 84 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 HKR1P10072 659 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 KIR2DS4P43632 304 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 KIR2DS1Q14954 304 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 Q6P435 159 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 CCDC71LQ8N9Z2 235 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 TMEM231Q9H6L2 316 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 TREM1Q9NP99 234 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 FAM212BQ9NTI7 297 aaPredicted RBP9.96□□□□□ -0.81
COL25A1-202ENST00000399127 TUBD1Q9UJT1 453 aa9.96□□□□□ -0.81
COL25A1-202ENST00000399127 AHRRA9YTQ3 701 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 K7EPK0 472 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 WNT9BO14905 357 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 DEDDO75618 318 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 MT-ND4LP03901 98 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 SNRPCP09234 159 aaKnown RBP9.96□□□□□ -0.82
COL25A1-202ENST00000399127 S100A2P29034 98 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 RPL12P30050 165 aaKnown RBP9.96□□□□□ -0.82
COL25A1-202ENST00000399127 RPL7L1Q6DKI1 246 aaKnown RBP9.96□□□□□ -0.82
COL25A1-202ENST00000399127 Q6ZS49 121 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 FAM71E2Q8N5Q1 922 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 PLPPR1Q8TBJ4 325 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 PHYHIPLQ96FC7 376 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 C18orf12Q96KH6 178 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 PLSCR4Q9NRQ2 329 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 OR1A1Q9P1Q5 309 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 DNAJB11Q9UBS4 358 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 RAXQ9Y2V3 346 aa9.96□□□□□ -0.82
COL25A1-202ENST00000399127 UBE2J1Q9Y385 318 aaPredicted RBP9.96□□□□□ -0.82
COL25A1-202ENST00000399127 IQCF6A8MYZ5 107 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 J3QW42 95 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 F2RL1P55085 397 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 IL13RA2Q14627 380 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 TBR1Q16650 682 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 PCSK4Q6UW60 755 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 LINC00596Q86U02 117 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 LGI3Q8N145 548 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 STOML3Q8TAV4 291 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 CACNA1DQ01668 2161 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 A6NLC8 198 aa9.95□□□□□ -0.82
COL25A1-202ENST00000399127 ZNF705EA8MWA4 302 aaPredicted RBP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms