RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TMEM167BQ9NRX6 74 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 IGHV3-43A0A0B4J1X8 118 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 IGHV3-43DP0DP04 118 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 TCL1AP56279 114 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 RPS23P62266 143 aaKnown RBP9.59□□□□□ -0.87
HPS4-202ENST00000398145 COL5A1-AS1Q5SY13 56 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 STUMQ69YW2 141 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 ZBTB34Q8NCN2 500 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 MARS2Q96GW9 593 aaKnown RBP9.59□□□□□ -0.87
HPS4-202ENST00000398145 ADH4P08319 380 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 LIFP15018 202 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 IER3P46695 156 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 PAFAH1B2P68402 229 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 ELOBQ15370 118 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 ZNF658BQ4V348 819 aaPredicted RBP9.59□□□□□ -0.87
HPS4-202ENST00000398145 TRAT1Q6PIZ9 186 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 TAF15Q92804 592 aaKnown RBP eCLIP9.59□□□□□ -0.87
HPS4-202ENST00000398145 R3HDM4Q96D70 268 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 DDA1Q9BW61 102 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 CRISPLD2Q9H0B8 497 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 ZNF552Q9H707 407 aaPredicted RBP9.59□□□□□ -0.87
HPS4-202ENST00000398145 GVINP1Q7Z2Y8 2422 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 ICE1Q9Y2F5 2266 aa9.59□□□□□ -0.87
HPS4-202ENST00000398145 TRGV10A0A0A0MS01 117 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 SRP14P37108 136 aaKnown RBP9.58□□□□□ -0.88
HPS4-202ENST00000398145 FGF12P61328 243 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 C21orf62-AS1Q17RA5 79 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 HLA-BQ31612 363 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 OR8G5Q8NG78 346 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 OR5D13Q8NGL4 314 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 OR10X1Q8NGY0 326 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 SSMEM1Q8WWF3 244 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 CISD1Q9NZ45 108 aaKnown RBP9.58□□□□□ -0.88
HPS4-202ENST00000398145 NAGKQ9UJ70 344 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 LOXL2Q9Y4K0 774 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 ATP23Q9Y6H3 246 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 LOC285556D6RIA3 1793 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 A0A0J9YW62 118 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 G6PCP35575 357 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 CAMPP49913 170 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 BTNL3Q6UXE8 466 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 OR1L6Q8NGR2 347 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 OR4C12Q96R67 309 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 GPHA2Q96T91 129 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 J3QR89 54 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 CDIPTO14735 213 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 PSG4Q00888 419 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 C1QL2Q7Z5L3 287 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 SELENOHQ8IZQ5 122 aaKnown RBP9.58□□□□□ -0.88
HPS4-202ENST00000398145 ABHD3Q8WU67 409 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 ZNF501Q96CX3 271 aaPredicted RBP9.58□□□□□ -0.88
HPS4-202ENST00000398145 WDR61Q9GZS3 305 aaKnown RBP9.58□□□□□ -0.88
HPS4-202ENST00000398145 HIF1ANQ9NWT6 349 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 UBE2CO00762 179 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 LINC00596Q86U02 117 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 OR2Y1Q8NGV0 311 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 FAM117AQ9C073 453 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 RPRMQ9NS64 109 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 WBP1LQ9NX94 342 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 CLN8Q9UBY8 286 aa9.58□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A10PA6NDY2 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A18PA6NE21 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A16PA6NEW6 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A20PA6NIJ5 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A8PA6NJQ4 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A7PA6NKC0 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A22PA8MWA6 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A12PA8MX19 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A5PA8MXJ8 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A23PA8MXZ1 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 TGFBR3LH3BV60 316 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 CNIH1O95406 144 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A15PP0C7V4 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A13PP0C7W8 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A14PP0C7W9 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FAM90A24PP0C7X0 464 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 CSN1S1P47710 185 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 TRA2AQ13595 282 aaKnown RBP eCLIP9.57□□□□□ -0.88
HPS4-202ENST00000398145 OR1C1Q15619 314 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 LYG1Q8N1E2 194 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 OR4P4Q8NGL7 312 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 HSD17B10Q99714 261 aaKnown RBP9.57□□□□□ -0.88
HPS4-202ENST00000398145 ELOVL1Q9BW60 279 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 SRD5A3Q9H8P0 318 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 HES4Q9HCC6 221 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 FBLN5Q9UBX5 448 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 YTHDF2Q9Y5A9 579 aaKnown RBP9.57□□□□□ -0.88
HPS4-202ENST00000398145 COLCA2A8K830 154 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 SLC31A2O15432 143 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 PGLYRP1O75594 196 aaPredicted RBP9.57□□□□□ -0.88
HPS4-202ENST00000398145 NDUFB4O95168 129 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 MPZP25189 248 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 CCL11P51671 97 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 SPCS3P61009 180 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 SARAFQ96BY9 339 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 GPR146Q96CH1 333 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 HSPB9Q9BQS6 159 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 EGLN1Q9GZT9 426 aa9.57□□□□□ -0.88
HPS4-202ENST00000398145 RNF122Q9H9V4 155 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms