RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 MAML2Q8IZL2 1156 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 SPEM1Q8N4L4 309 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 SUMF1Q8NBK3 374 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 OR56B2PQ8NGI1 322 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 OR5L1Q8NGL2 311 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 OR11L1Q8NGX0 322 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 ZCCHC14Q8WYQ9 949 aaKnown RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 SDSLQ96GA7 329 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 OR5B12Q96R08 314 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 VAMP8Q9BV40 100 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 PECRQ9BY49 303 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 SRXN1Q9BYN0 137 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 LIME1Q9H400 295 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 GPR35Q9HC97 309 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 AURKAIP1Q9NWT8 199 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 RCL1Q9Y2P8 373 aaKnown RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 RFNGQ9Y644 331 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 U3KQA8 63 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 SVEP1Q4LDE5 3571 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CACNA1DQ01668 2161 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 DOCK10Q96BY6 2186 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CEP250Q9BV73 2442 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 IGLV3-12A0A075B6K2 115 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 NSG1A0A0A6YYJ2 146 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 TRAV39A0A0B4J263 110 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 A0A0U1RQV5 110 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 A0A1W2PNV4 684 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 K7ESF4 209 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 TNFSF12O43508 249 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 IGHEP01854 428 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 OR5G3P0C626 314 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 PF4V1P10720 104 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CEACAM1P13688 526 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 PTGER4P35408 488 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 IL24Q13007 206 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 ZNF266Q14584 549 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 WIPI1Q5MNZ9 446 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 LRP11Q86VZ4 500 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 SULF2Q8IWU5 870 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 GJC3Q8NFK1 279 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 OR4C5Q8NGB2 326 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CLDND2Q8NHS1 167 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 FGFBP3Q8TAT2 258 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 TMEM37Q8WXS4 190 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 PIGCQ92535 297 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 ANAPC16Q96DE5 110 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CLUHP3Q96NS8 147 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CIB3Q96Q77 187 aaPredicted RBP4.33□□□□□ -1.72
SSR1-202ENST00000397511 RBKSQ9H477 322 aa4.33□□□□□ -1.72
SSR1-202ENST00000397511 CACNA1GO43497 2377 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 IGKV1-27A0A075B6S5 117 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 TMEM265A0A087WTH1 108 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 NDUFS8O00217 210 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 DHHO43323 396 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 CXCL13O43927 109 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ZIC3O60481 467 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 DHRS3O75911 302 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 OMGP23515 440 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 PIGPP57054 158 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 RPL19P84098 196 aaKnown RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 PCOLCEQ15113 449 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 CRIP3Q6Q6R5 217 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 FBXW12Q6X9E4 464 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 KMT5CQ86Y97 462 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 RHBDD1Q8TEB9 315 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 SAP25Q8TEE9 199 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ABHD3Q8WU67 409 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 MRPL24Q96A35 216 aaKnown RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 MOB3AQ96BX8 217 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 NUDT11Q96G61 164 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ABHD17AQ96GS6 310 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 PYGO2Q9BRQ0 406 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 C19orf25Q9UFG5 118 aaPredicted RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 FUT9Q9Y231 359 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 NCKAP5O14513 1909 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ADGRG4Q8IZF6 3080 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 GVINP1Q7Z2Y8 2422 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 LOC102723971A0A1B0GUV8 181 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 PGPEP1LA6NFU8 196 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 OR7C1O76099 320 aaPredicted RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 ZNF32P17041 273 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ATP6V0CP27449 155 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 WNT5AP41221 380 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 CNN1P51911 297 aaKnown RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 SUMO3P55854 103 aaPredicted RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 TAS2R46P59540 309 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 PRDX4Q13162 271 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 IL13RA2Q14627 380 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 RTL6Q6ICC9 239 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 SPINK14Q6IE38 97 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 TEX43Q6ZNM6 134 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 LYZL2Q7Z4W2 148 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 MYPOPQ86VE0 399 aaPredicted RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 RPS19BP1Q86WX3 136 aaKnown RBP4.32□□□□□ -1.72
SSR1-202ENST00000397511 LYG1Q8N1E2 194 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ZNF738Q8NE65 137 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 FAM216AQ8WUB2 273 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 PCGF1Q9BSM1 259 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 CSTL1Q9H114 145 aa4.32□□□□□ -1.72
SSR1-202ENST00000397511 ZNF552Q9H707 407 aaPredicted RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms