RNA–Protein interactions for RNA: ENST00000397066.8

CCNF-202, Transcript of cyclin F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNF, Length 4,283 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-202ENST00000397066 FAM90A18PA6NE21 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A16PA6NEW6 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A20PA6NIJ5 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A8PA6NJQ4 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A7PA6NKC0 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A22PA8MWA6 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A12PA8MX19 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A5PA8MXJ8 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A23PA8MXZ1 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A15PP0C7V4 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A13PP0C7W8 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A14PP0C7W9 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 FAM90A24PP0C7X0 464 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 COX6A1P12074 109 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 OR4X1Q8NH49 305 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 IL22RA2Q969J5 263 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 OR4C12Q96R67 309 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 OR51I2Q9H344 312 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 MYO15AQ9UKN7 3530 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 EPHA8P29322 1005 aaPredicted RBP12.58□□□□□ -0.4
CCNF-202ENST00000397066 MCEMP1Q8IX19 187 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 OR1A1Q9P1Q5 309 aa12.58□□□□□ -0.4
CCNF-202ENST00000397066 RFPL3SP0C7P2 107 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 PLPPR1Q8TBJ4 325 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 RNF115Q9Y4L5 304 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 SCGB1D1O95968 90 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 NAPSAO96009 420 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 CCL4P13236 92 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 COL10A1Q03692 680 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 CEACAM21Q3KPI0 293 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 Q3ZCU0 254 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 TMEM183AQ8IXX5 376 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 AGBL5Q8NDL9 886 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 IFI44Q8TCB0 444 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 R4GN57 208 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 IGKV1-6A0A0C4DH72 117 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 ZNF716A6NP11 495 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 DNPH1O43598 174 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 CXCL12P48061 93 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 SERF2P84101 59 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 MYPOPQ86VE0 399 aaPredicted RBP12.57□□□□□ -0.4
CCNF-202ENST00000397066 FAM58AQ8N1B3 248 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 OR10G4Q8NGN3 311 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 OR1P1Q8NH06 330 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 APOBEC3DQ96AK3 386 aaPredicted RBP12.57□□□□□ -0.4
CCNF-202ENST00000397066 P2RX4Q99571 388 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 WDR54Q9H977 334 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 TRAV1-1A0A0B4J248 108 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 DKK1O94907 266 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 SYNGR4O95473 234 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 NDUFB7P17568 137 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 MLF1P58340 268 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 PMS2P11Q13670 270 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 ODF3L1Q8IXM7 274 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 PCGF1Q9BSM1 259 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 PHF7Q9BWX1 381 aaPredicted RBP12.57□□□□□ -0.4
CCNF-202ENST00000397066 PROK2Q9HC23 129 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 LIN7CQ9NUP9 197 aaKnown RBP12.57□□□□□ -0.4
CCNF-202ENST00000397066 FUT9Q9Y231 359 aa12.57□□□□□ -0.4
CCNF-202ENST00000397066 SLC31A2O15432 143 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 CD55P08174 381 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 MEF2BQ02080 365 aaPredicted RBP12.56□□□□□ -0.4
CCNF-202ENST00000397066 Q6ZRM9 215 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 ZNF525Q8N782 197 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 CA5BP1Q8WTZ4 195 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 IMMP1LQ96LU5 166 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 KRASP01116 189 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 UMODP07911 640 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 UNQ6494/PRO21346Q6UXR6 183 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 MRPL30Q8TCC3 161 aaKnown RBP12.56□□□□□ -0.4
CCNF-202ENST00000397066 DNASE2BQ8WZ79 361 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 C1QTNF5Q9BXJ0 243 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 COL5A1P20908 1838 aaPredicted RBP12.56□□□□□ -0.4
CCNF-202ENST00000397066 RTP5Q14D33 572 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 SPATA46Q5T0L3 261 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 ZNF573Q86YE8 665 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 PRDM14Q9GZV8 571 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 ZNF552Q9H707 407 aaPredicted RBP12.56□□□□□ -0.4
CCNF-202ENST00000397066 TMEM242Q9NWH2 141 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 WASF3Q9UPY6 502 aa12.56□□□□□ -0.4
CCNF-202ENST00000397066 LRP5LA4QPB2 252 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 NGFP01138 241 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 BMP5P22003 454 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 SRD5A3Q9H8P0 318 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 EML6Q6ZMW3 1958 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 ZNF407Q9C0G0 2248 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 TRBV24-1A0A075B6N3 115 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 A0A0U1RQK1 487 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 LRRC3CA6NJW4 275 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 APLNRP35414 380 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 ARL16Q0P5N6 197 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 CST9LP1Q5W188 147 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 KCNIP4Q6PIL6 250 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 TAF15Q92804 592 aaKnown RBP eCLIP12.55□□□□□ -0.4
CCNF-202ENST00000397066 TMEM9BQ9NQ34 198 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 ATG2AQ2TAZ0 1938 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 MMP7P09237 267 aaPredicted RBP12.55□□□□□ -0.4
CCNF-202ENST00000397066 CA6P23280 308 aa12.55□□□□□ -0.4
CCNF-202ENST00000397066 ZNF726P1Q15940 193 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms