RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF845Q96IR2 970 aaPredicted RBP11.36□□□□□ -0.59
TRIM40-207ENST00000396581 HIST1H2BLQ99880 126 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 REPIN1Q9BWE0 567 aaKnown RBP11.36□□□□□ -0.59
TRIM40-207ENST00000396581 GPR35Q9HC97 309 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 RYDENQ9NUL5 291 aaKnown RBP11.36□□□□□ -0.59
TRIM40-207ENST00000396581 FOXJ2Q9P0K8 574 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 OR14J1Q9UGF5 321 aa11.36□□□□□ -0.59
TRIM40-207ENST00000396581 SDK2Q58EX2 2172 aa11.35□□□□□ -0.59
TRIM40-207ENST00000396581 FABP4P15090 132 aa11.35□□□□□ -0.59
TRIM40-207ENST00000396581 CARD18P57730 90 aa11.35□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF324BQ6AW86 544 aaPredicted RBP11.35□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF525Q8N782 197 aa11.35□□□□□ -0.59
TRIM40-207ENST00000396581 LSM10Q969L4 123 aaKnown RBP11.35□□□□□ -0.59
TRIM40-207ENST00000396581 HS3ST6Q96QI5 342 aa11.35□□□□□ -0.59
TRIM40-207ENST00000396581 AGMATQ9BSE5 352 aa11.35□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF665Q9H7R5 613 aa11.35□□□□□ -0.59
TRIM40-207ENST00000396581 CNOT1A5YKK6 2376 aaKnown RBP11.35□□□□□ -0.59
TRIM40-207ENST00000396581 G3V3Y1 287 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 LY86O95711 162 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 DDTP30046 118 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 MLF1P58340 268 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 RPS18P62269 152 aaKnown RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 LRRC75BQ2VPJ9 315 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 COA6Q5JTJ3 125 aaKnown RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 WDR25Q64LD2 544 aaPredicted RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 CENPVQ7Z7K6 275 aaPredicted RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 MRGPRGQ86SM5 289 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 LINC00596Q86U02 117 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 CPEB3Q8NE35 698 aaKnown RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 MRPL30Q8TCC3 161 aaKnown RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 PACRGQ96M98 296 aaPredicted RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 CABLES2Q9BTV7 478 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 RSG1Q9BU20 258 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 GPR87Q9BY21 358 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 VAX2Q9UIW0 290 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 MUC6Q6W4X9 2439 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 ZNF292O60281 2723 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 MKRN2OSH3BPM6 223 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 NXPH3O95157 252 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 CNOT4O95628 575 aaKnown RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 CEACAM21Q3KPI0 293 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 PDZD11Q5EBL8 140 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 Q6ZRM9 215 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 RPS19BP1Q86WX3 136 aaKnown RBP11.34□□□□□ -0.59
TRIM40-207ENST00000396581 TMEM183AQ8IXX5 376 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 RHOVQ96L33 236 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 VSIRQ9H7M9 311 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 SRD5A3Q9H8P0 318 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 MTCH1Q9NZJ7 389 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 OR2W1Q9Y3N9 320 aa11.34□□□□□ -0.59
TRIM40-207ENST00000396581 ZFP92A6NM28 416 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 C21orf140B9A014 251 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 DVL1O14640 695 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 PFN1P07737 140 aaKnown RBP11.33□□□□□ -0.6
TRIM40-207ENST00000396581 PGA5P0DJD9 388 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 S100GP29377 79 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 IL2RGP31785 369 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 CEACAM6P40199 344 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 ARL16Q0P5N6 197 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 PRDX4Q13162 271 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 JOSD1Q15040 202 aaPredicted RBP11.33□□□□□ -0.6
TRIM40-207ENST00000396581 BATF2Q8N1L9 274 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 PRSS33Q8NF86 280 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 OR56B2PQ8NGI1 322 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 SCGB1C1Q8TD33 95 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 TMEM45BQ96B21 275 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 S100PBPQ96BU1 408 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 CNTRLQ7Z7A1 2325 aa11.33□□□□□ -0.6
TRIM40-207ENST00000396581 LRP5LA4QPB2 252 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 TSTD3H0UI37 97 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 SYNGR2O43760 224 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 SS18L1O75177 396 aaPredicted RBP11.32□□□□□ -0.6
TRIM40-207ENST00000396581 IGKV1-39P01597 117 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 IGKV1D-39P04432 117 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 OTX2P32243 289 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 MDH2P40926 338 aaKnown RBP11.32□□□□□ -0.6
TRIM40-207ENST00000396581 TMEM267Q0VDI3 215 aaPredicted RBP11.32□□□□□ -0.6
TRIM40-207ENST00000396581 HAPLN4Q86UW8 402 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 OR10A7Q8NGE5 316 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 PINX1Q96BK5 328 aaKnown RBP11.32□□□□□ -0.6
TRIM40-207ENST00000396581 SGCZQ96LD1 299 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 SSX3Q99909 188 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 PLK3Q9H4B4 646 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 H3BP45 60 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.32□□□□□ -0.6
TRIM40-207ENST00000396581 SLC33A1O00400 549 aaPredicted RBP11.32□□□□□ -0.6
TRIM40-207ENST00000396581 TNFSF12O43508 249 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 CXCL13O43927 109 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 CYTIPO60759 359 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 HLA-HP01893 362 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 PSG2P11465 335 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 Q0VFX4 171 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 LBHQ53QV2 105 aaPredicted RBP11.32□□□□□ -0.6
TRIM40-207ENST00000396581 TMEM41BQ5BJD5 291 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 SLC25A24Q6NUK1 477 aa11.32□□□□□ -0.6
TRIM40-207ENST00000396581 C20orf204Q6ZNR8 217 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms