RNA–Protein interactions for RNA: ENST00000393452.7

TDP1-202, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best) BASIC

Gene TDP1, Length 2,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-202ENST00000393452 A0A0G2JRQ6 117 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 IGSF23A1L1A6 192 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 FAM24AA6NFZ4 105 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 KIAA1324LA8MWY0 1029 aaPredicted RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 SIGLEC5O15389 551 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 HSPA12AO43301 675 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 TMEM50AO95807 157 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 IGKV1-39P01597 117 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 IGKV1D-39P04432 117 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SERPINE2P07093 398 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 CEACAM8P31997 349 aaPredicted RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 CFHR2P36980 270 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 AKR1C2P52895 323 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 F2RL1P55085 397 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 AKR1C1Q04828 323 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 MZT1Q08AG7 82 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SMIM21Q3B7S5 101 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 ODF3L1Q8IXM7 274 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 PRR18Q8N4B5 295 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 TMEM252Q8N6L7 170 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 S100PBPQ96BU1 408 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 GPR146Q96CH1 333 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 LRRC46Q96FV0 321 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 COQ2Q96H96 371 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 UFSP2Q9NUQ7 469 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 KCNIP1Q9NZI2 227 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 CARHSP1Q9Y2V2 147 aaKnown RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 ZGRF1Q86YA3 2104 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 DIDO1Q9BTC0 2240 aaKnown RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 APC2O95996 2303 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 MAP1BP46821 2468 aaKnown RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 OOEPA6NGQ2 149 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 C12orf77C9JDV5 145 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SSSCA1O60232 199 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 OR8U9P0C7N5 309 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 CEACAM6P40199 344 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 CD200P41217 278 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 OR3A1P47881 315 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 NKX6-1P78426 367 aaPredicted RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 HOXA4Q00056 320 aaPredicted RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 ZNF273Q14593 569 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 ZNF585BQ52M93 769 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 Q6ZRG5 221 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SPAG16Q8N0X2 631 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 OR8U1Q8NH10 309 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 UBALD1Q8TB05 177 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 FAM57AQ8TBR7 257 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 GALMQ96C23 342 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SFXN3Q9BWM7 321 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SLC25A31Q9H0C2 315 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 MAGT1Q9H0U3 335 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 SEBOXQ9HB31 216 aaPredicted RBP7.6□□□□□ -1.19
TDP1-202ENST00000393452 PLCE1Q9P212 2302 aa7.6□□□□□ -1.19
TDP1-202ENST00000393452 IGHV3-13P01766 116 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 CD5P06127 495 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 RAB5CP51148 216 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 PAX9P55771 341 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 TAGLNQ01995 201 aaKnown RBP7.59□□□□□ -1.19
TDP1-202ENST00000393452 AESQ08117 197 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 ZNF266Q14584 549 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 DRAM1Q8N682 238 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 ZBTB34Q8NCN2 500 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 OR1L1Q8NH94 360 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 LIN7CQ9NUP9 197 aaKnown RBP7.59□□□□□ -1.19
TDP1-202ENST00000393452 UQCC1Q9NVA1 299 aa7.59□□□□□ -1.19
TDP1-202ENST00000393452 DSPP15924 2871 aaKnown RBP7.59□□□□□ -1.19
TDP1-202ENST00000393452 RP1L1Q8IWN7 2480 aaPredicted RBP7.59□□□□□ -1.2
TDP1-202ENST00000393452 SRRM5B3KS81 715 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 CHST1O43916 411 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 HBZP02008 142 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 MUC1P15941 1255 aaPredicted RBP7.59□□□□□ -1.2
TDP1-202ENST00000393452 GLRXP35754 106 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 ZNF83P51522 516 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 VAMP2P63027 116 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 DEFA5Q01523 94 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 COL10A1Q03692 680 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 BAXQ07812 192 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 EIF4EBP1Q13541 118 aaPredicted RBP7.59□□□□□ -1.2
TDP1-202ENST00000393452 MSMO1Q15800 293 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 Q6ZRM9 215 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 ZNF295-AS1Q8N0V1 137 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 SVBPQ8N300 66 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 OR10Z1Q8NGY1 313 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 TMEM171Q8WVE6 324 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 TSNAXQ99598 290 aaKnown RBP7.59□□□□□ -1.2
TDP1-202ENST00000393452 SEC11CQ9BY50 192 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 PPP1R3CQ9UQK1 317 aa7.59□□□□□ -1.2
TDP1-202ENST00000393452 RBM7Q9Y580 266 aaKnown RBP7.59□□□□□ -1.2
TDP1-202ENST00000393452 MGAQ8IWI9 3026 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 AKAP13Q12802 2813 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 IGLV3-9A0A075B6K5 115 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 MKRN2OSH3BPM6 223 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 ZNF737O75373 536 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 IGKV1-5P01602 117 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 CRYAAP02489 173 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 ARHGDIBP52566 201 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 SWI5Q1ZZU3 235 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 LRP11Q86VZ4 500 aa7.58□□□□□ -1.2
TDP1-202ENST00000393452 FAM90A1Q86YD7 464 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms