RNA–Protein interactions for RNA: ENST00000393310.5

LIMS1-203, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 4,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-203ENST00000393310 GAGE12IP0CL82 117 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 CD37P11049 281 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 ERGP11308 486 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 AZU1P20160 251 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 PEBP1P30086 187 aaKnown RBP6.99□□□□□ -1.29
LIMS1-203ENST00000393310 NPBWR2P48146 333 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 LSM6P62312 80 aaKnown RBP6.99□□□□□ -1.29
LIMS1-203ENST00000393310 GAGE4Q13068 117 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 IZUMO4Q1ZYL8 232 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 MESTQ5EB52 335 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 C1orf140Q5VVS0 124 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 SLC35F2Q8IXU6 374 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 LFNGQ8NES3 379 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 ABHD4Q8TB40 342 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 Q8WTZ3 238 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 LRRC58Q96CX6 371 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 MARVELD1Q9BSK0 173 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 MEPEQ9NQ76 525 aaPredicted RBP6.99□□□□□ -1.29
LIMS1-203ENST00000393310 SLC17A5Q9NRA2 495 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 UQCC1Q9NVA1 299 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 C1RLQ9NZP8 487 aa6.99□□□□□ -1.29
LIMS1-203ENST00000393310 C11orf98E9PRG8 122 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 K7EP13 123 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 SOCS2O14508 198 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 F2RL1P55085 397 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 POU3F1Q03052 451 aaPredicted RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 CRMP1Q14194 572 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 PRSS53Q2L4Q9 553 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TECRLQ5HYJ1 363 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 ALG10BQ5I7T1 473 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 FAAP20Q6NZ36 180 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF66Q6ZN08 573 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TMEM151AQ8N4L1 468 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 HIST1H2BAQ96A08 127 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 OR4C12Q96R67 309 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 FNDC4Q9H6D8 234 aaPredicted RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 RNF122Q9H9V4 155 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 CA10Q9NS85 328 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TMEM100Q9NV29 134 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 JKAMPQ9P055 326 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TNFSF18Q9UNG2 199 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 AMMECR1Q9Y4X0 333 aaPredicted RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 COX11Q9Y6N1 276 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 AKAP6Q13023 2319 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 LIPT2A6NK58 231 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 DCTN6O00399 190 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TAS2R31P59538 309 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TAS2R19P59542 299 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 CYCSP99999 105 aaKnown RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 PPP1R1AQ13522 171 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TPBGQ13641 420 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 JOSD1Q15040 202 aaPredicted RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 ALG10Q5BKT4 473 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 ZFP41Q8N8Y5 198 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 CLCC1Q96S66 551 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 MRPS28Q9Y2Q9 187 aaKnown RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 A0A1W2PR48 441 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 C7orf72A4D263 438 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 F8WDY8 70 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 PPP6CO00743 305 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 H1F0P07305 194 aaKnown RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 FOLR2P14207 255 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 TFPI2P48307 235 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 RPL15P61313 204 aaKnown RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 OR2F1Q13607 317 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 C18orf21Q32NC0 220 aaPredicted RBP6.98□□□□□ -1.29
LIMS1-203ENST00000393310 LAMTOR1Q6IAA8 161 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 CNIH2Q6PI25 160 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 LINC00471Q8N535 108 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 SNX22Q96L94 193 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 VSTM2LQ96N03 204 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 HSPB9Q9BQS6 159 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 MAP1LC3AQ9H492 121 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 PEMTQ9UBM1 199 aa6.98□□□□□ -1.29
LIMS1-203ENST00000393310 MEIKINA0A087WXM9 373 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 TCRBV9S1A1TA0A576 114 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 C7orf77A4D0Y5 90 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 VENTXO95231 258 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ACP2P11117 423 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF20P17024 532 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SRSF4Q08170 494 aaKnown RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 CEACAM16Q2WEN9 425 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ASB13Q8WXK3 278 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 SIGLEC10Q96LC7 697 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 TMEM56Q96MV1 263 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 OR2V2Q96R30 315 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF256Q9Y2P7 627 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 TMEM56-RWDD3S4R434 201 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 KIF26AQ9ULI4 1882 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ARHGEF17Q96PE2 2063 aaPredicted RBP6.97□□□□□ -1.29
LIMS1-203ENST00000393310 A0A1W2PNR3 127 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 A0A1W2PPM1 405 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 KIR2DS4P43632 304 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 PLGLAQ15195 96 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ZNF74Q16587 644 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 TREML4Q6UXN2 200 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 ZDHHC22Q8N966 263 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 OR1K1Q8NGR3 316 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 OR4S2Q8NH73 311 aa6.97□□□□□ -1.29
LIMS1-203ENST00000393310 EDARADDQ8WWZ3 215 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms