RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 TIMP4Q99727 224 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 FBXO34Q9NWN3 711 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 HSPB8Q9UJY1 196 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 PLPP3O14495 311 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 FTH1P19P0C7X4 201 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 B4GALNT1Q00973 533 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 C1orf140Q5VVS0 124 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 OR5A1Q8NGJ0 315 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 DAZLQ92904 295 aaKnown RBP6.64□□□□□ -1.35
VTI1A-201ENST00000393077 APOOQ9BUR5 198 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 CD207Q9UJ71 328 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 KLHDC2Q9Y2U9 406 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 HS3ST3A1Q9Y663 406 aa6.64□□□□□ -1.35
VTI1A-201ENST00000393077 NKX2-6A6NCS4 301 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 C2orf72A6NCS6 295 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 G3V3Y1 287 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 KLF4O43474 513 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 MT-ND6P03923 174 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF17P17021 662 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 SRIP30626 198 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 UBE2G1P62253 170 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 TIGITQ495A1 244 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 PDLIM3Q53GG5 364 aaPredicted RBP6.63□□□□□ -1.35
VTI1A-201ENST00000393077 C9orf135Q5VTT2 229 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 FAM90A2PQ658T7 463 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 VN1R2Q8NFZ6 395 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 OR52M1Q8NGK5 317 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 OR2T6Q8NHC8 308 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 TMEM230Q96A57 120 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 SPACA9Q96E40 222 aaPredicted RBP6.63□□□□□ -1.35
VTI1A-201ENST00000393077 UBTD1Q9HAC8 227 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 PSENENQ9NZ42 101 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 THAP10Q9P2Z0 257 aaPredicted RBP6.63□□□□□ -1.35
VTI1A-201ENST00000393077 R4GMQ9 66 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 GVINP1Q7Z2Y8 2422 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 B4GALT2O60909 372 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 CRYAAP02489 173 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 BCL6P41182 706 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 TCL1AP56279 114 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 HERV-K104P63124 156 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 MRPL54Q6P161 138 aaKnown RBP6.63□□□□□ -1.35
VTI1A-201ENST00000393077 OR2M7Q8NG81 312 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 OR8B3Q8NGG8 313 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 OR2I1PQ8NGU4 316 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 PRSS27Q9BQR3 290 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 TEX50A0A1B0GTY4 177 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 CD5LO43866 347 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 LILRA1O75019 489 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 VENTXO95231 258 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 FAHP16930 419 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 PDLIM4P50479 330 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF83P51522 516 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 SPSB3Q6PJ21 355 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 OR10G9Q8NGN4 311 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 OR10G7Q8NGN6 311 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 NAA38Q9BRA0 125 aaKnown RBP6.63□□□□□ -1.35
VTI1A-201ENST00000393077 VDAC3Q9Y277 283 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 RFNGQ9Y644 331 aa6.63□□□□□ -1.35
VTI1A-201ENST00000393077 A0A087WV48 116 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 SH2D1BO14796 132 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 PF4V1P10720 104 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 FCGR2AP12318 317 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF841Q6ZN19 808 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 RTBDNQ9BSG5 229 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 LRRC61Q9BV99 259 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 QTRT1Q9BXR0 403 aaKnown RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 WDR54Q9H977 334 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 ST20Q9HBF5 79 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 ICAM5Q9UMF0 924 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 TSSC4Q9Y5U2 329 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 TDRD15B5MCY1 1934 aaKnown RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 LCTP09848 1927 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 MYOFQ9NZM1 2061 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 A0A0B4J2E0 115 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 A0A1B0GX12 115 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 OR4C46A6NHA9 309 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 H0Y8X5 98 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 EPPINO95925 133 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF133P52736 654 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 SERF2P84101 59 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 C17orf67Q0P5P2 114 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 MYLKQ15746 1914 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 PRTGQ2VWP7 1150 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 CEACAM21Q3KPI0 293 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 Q6ZSR6 202 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 SMIM20Q8N5G0 67 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 FAM174AQ8TBP5 190 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 ZPLD1Q8TCW7 415 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 GPR146Q96CH1 333 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 SSBP4Q9BWG4 385 aaPredicted RBP6.62□□□□□ -1.35
VTI1A-201ENST00000393077 CLEC1BQ9P126 229 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 TAAR3PQ9P1P4 343 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 FBXL7Q9UJT9 491 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 A0A0G2JMZ2 1700 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 LOC102725191A0A1B0GVB3 256 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 ZNF732B4DXR9 585 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 NDUFB4O95168 129 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 CFIP05156 583 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 LINC00869P0C866 280 aa6.62□□□□□ -1.35
VTI1A-201ENST00000393077 C3orf79P0CE67 100 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms