RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 JOSD1Q15040 202 aaPredicted RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 ZNF720Q7Z2F6 126 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 C6orf120Q7Z4R8 191 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 HSD17B13Q7Z5P4 300 aaPredicted RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 PDZD9Q8IXQ8 264 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 KRTCAP2Q8N6L1 136 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 NEXN-AS1Q8NBZ9 246 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 NODALQ96S42 347 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SULT4A1Q9BR01 284 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 POMPQ9Y244 141 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 OR51B4Q9Y5P0 310 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 A0A087WW49 117 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 C5orf49A4QMS7 147 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SOCS2O14508 198 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 MRASO14807 208 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 COX7A2P2O60397 106 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 FOXH1O75593 365 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 OR2A4O95047 310 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 HOXB6P17509 224 aaKnown RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 PSMD8P48556 350 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 POLR2HP52434 150 aaKnown RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 PRSS57Q6UWY2 283 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SLC16A13Q7RTY0 426 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 ZADH2Q8N4Q0 377 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 ZNF645Q8N7E2 425 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 OR1L8Q8NGR8 309 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SFT2D1Q8WV19 159 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 WWC2-AS2Q96NR7 200 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 OR2A7Q96R45 310 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 RASL11BQ9BPW5 248 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SMIM3Q9BZL3 60 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 POMKQ9H5K3 350 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 MOB4Q9Y3A3 225 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 ARHGEF10O15013 1369 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 IGHV2OR16-5A0A0B4J2B6 119 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 A0A1B0GWB2 263 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 KRBOX1C9JBD0 128 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SAP18O00422 153 aaKnown RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 PPP3R1P63098 170 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SURF2Q15527 256 aaPredicted RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 ZNF181Q2M3W8 571 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 TMEM255AQ5JRV8 349 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 CYHR1Q6ZMK1 362 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 C2orf15Q8WU43 125 aaKnown RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 LINC00476Q8WZB0 136 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 RBPMSQ93062 196 aaKnown RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 RPUSD4Q96CM3 377 aaKnown RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 ZNF670Q9BS34 389 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SRMSQ9H3Y6 488 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 JPT2Q9H910 190 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 UQCC1Q9NVA1 299 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 SPRR3Q9UBC9 169 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 TAF1P21675 1872 aa2.89□□□□□ -1.95
XRN1-202ENST00000392981 MYH14Q7Z406 1995 aaKnown RBP2.89□□□□□ -1.95
XRN1-202ENST00000392981 MYH6P13533 1939 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 MPTX1A8MV57 137 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 E7EQ34 232 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 ADRA2AP08913 450 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 NELFEP18615 380 aaKnown RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 SRP9P49458 86 aaKnown RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 AQP4P55087 323 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 ZNF616Q08AN1 781 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 INCA1Q0VD86 236 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 FOXE3Q13461 319 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 TMEM97Q5BJF2 176 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 ACP7Q6ZNF0 438 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 TMEM135Q86UB9 458 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 SPPL2BQ8TCT7 592 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 DCAKDQ8WVC6 231 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 HBEGFQ99075 208 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 TBL1XR1Q9BZK7 514 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 C6orf106Q9H6K1 298 aaPredicted RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 TMEM216Q9P0N5 145 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 DPM3Q9P2X0 92 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 KIF20BQ96Q89 1820 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 TNS1Q9HBL0 1735 aaKnown RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 ZNF609O15014 1411 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 EEF1E1-BLOC1S5C9J1V9 151 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 EEF1E1O43324 174 aaKnown RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 OR7C1O76099 320 aaPredicted RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 IGHG3P01860 377 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 CXCL2P19875 107 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 RPS3P23396 243 aaKnown RBP eCLIP2.88□□□□□ -1.95
XRN1-202ENST00000392981 PFN2P35080 140 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 ERVS71-1P61550 626 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 LRRC18Q8N456 261 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 OR2K2Q8NGT1 345 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 DEDD2Q8WXF8 326 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 TMEM70Q9BUB7 260 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 ZNF436Q9C0F3 470 aaPredicted RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 PRORYQ9H606 182 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 SLC7A10Q9NS82 523 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 PCTPQ9UKL6 214 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 KLF13Q9Y2Y9 288 aaPredicted RBP2.88□□□□□ -1.95
XRN1-202ENST00000392981 GON4LQ3T8J9 2241 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 SMCHD1A6NHR9 2005 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 TRBV5-4A0A0C4DH59 114 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 ZNF136P52737 540 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 RBX1P62877 108 aa2.88□□□□□ -1.95
XRN1-202ENST00000392981 CYCSP99999 105 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms