RNA–Protein interactions for RNA: ENST00000392959.5

LCA5-202, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-202ENST00000392959 PIPOXQ9P0Z9 390 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 KCNE5Q9UJ90 142 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 SEMA7AO75326 666 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 INO80CQ6PI98 192 aaPredicted RBP11.41□□□□□ -0.58
LCA5-202ENST00000392959 TMEM116Q8NCL8 245 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 DEFB124Q8NES8 71 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 VN1R17PQ8TDU5 208 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 FLYWCH2Q96CP2 140 aaKnown RBP11.41□□□□□ -0.58
LCA5-202ENST00000392959 ZNF501Q96CX3 271 aaPredicted RBP11.41□□□□□ -0.58
LCA5-202ENST00000392959 MAP1LC3CQ9BXW4 147 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 NAGKQ9UJ70 344 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 LAMB2P55268 1798 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 TMEM210A6NLX4 147 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 GREM1O60565 184 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 SNCGO76070 127 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 MELTFP08582 738 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 HIST1H1EP10412 219 aaKnown RBP11.41□□□□□ -0.58
LCA5-202ENST00000392959 ACP1P24666 158 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 PSG4Q00888 419 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 TFF2Q03403 129 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 C16orf82Q7Z2V1 217 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 OR1L8Q8NGR8 309 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 RSG1Q9BU20 258 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 TMEM222Q9H0R3 208 aa11.41□□□□□ -0.58
LCA5-202ENST00000392959 FOCADQ5VW36 1801 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 C21orf140B9A014 251 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 J3QR06 171 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 CYB5R3P00387 301 aaPredicted RBP11.4□□□□□ -0.58
LCA5-202ENST00000392959 CD1BP29016 333 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 RPL24P83731 157 aaKnown RBP11.4□□□□□ -0.58
LCA5-202ENST00000392959 ZXDCQ2QGD7 858 aaPredicted RBP11.4□□□□□ -0.58
LCA5-202ENST00000392959 C10orf113Q5VZT2 155 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 OR2J1Q9GZK6 312 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 LDLRAD3Q86YD5 345 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 ZNF665Q9H7R5 613 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 SAP30LQ9HAJ7 183 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 MS4A18H0YCH9 400 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 ISLRO14498 428 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 CIDEAO60543 219 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 AGFG2O95081 481 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 FGF12P61328 243 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 COTL1Q14019 142 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 MS4A18Q3C1V0 323 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 Q5BKY6 102 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 TEX30Q5JUR7 227 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 FDX2Q6P4F2 183 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 PERPQ96FX8 193 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 AQP10Q96PS8 301 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 ZNF552Q9H707 407 aaPredicted RBP11.4□□□□□ -0.58
LCA5-202ENST00000392959 IL19Q9UHD0 177 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 UFC1Q9Y3C8 167 aa11.4□□□□□ -0.58
LCA5-202ENST00000392959 ZNF638Q14966 1978 aaKnown RBP11.4□□□□□ -0.58
LCA5-202ENST00000392959 DOCK5Q9H7D0 1870 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 ZDBF2Q9HCK1 2354 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 FAM90A27PA6NNH2 459 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 ZNF716A6NP11 495 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 CORTO00230 105 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 HSPB1P04792 205 aaKnown RBP11.4□□□□□ -0.59
LCA5-202ENST00000392959 IFI6P09912 130 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 MEF2BQ02080 365 aaPredicted RBP11.4□□□□□ -0.59
LCA5-202ENST00000392959 TRIP6Q15654 476 aaKnown RBP11.4□□□□□ -0.59
LCA5-202ENST00000392959 LYRM7Q5U5X0 104 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 MDP1Q86V88 176 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 OR8I2Q8N0Y5 310 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 AQP3Q92482 292 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 TBX15Q96SF7 602 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 TREM2Q9NZC2 230 aa11.4□□□□□ -0.59
LCA5-202ENST00000392959 H0Y980 276 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 TRGC2P03986 189 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 FOXC1Q12948 553 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 CEACAM21Q3KPI0 293 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 NHLRC3Q5JS37 347 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 OR2V2Q96R30 315 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 NPVFQ9HCQ7 196 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 CACNA1DQ01668 2161 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 A0A1W2PRD5 423 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 A0A1W2PRF3 423 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 A0A1W2PRM7 423 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 WDFY1Q8IWB7 410 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 FAM181AQ8N9Y4 354 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 RASL11BQ9BPW5 248 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 LMX1BO60663 402 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 FCARP24071 287 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 RPL30P62888 115 aaKnown RBP11.39□□□□□ -0.59
LCA5-202ENST00000392959 OR1L1Q8NH94 360 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 MARVELD3Q96A59 401 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 R4GN57 208 aa11.39□□□□□ -0.59
LCA5-202ENST00000392959 ARFGEF1Q9Y6D6 1849 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 SH2D7A6NKC9 451 aaPredicted RBP11.38□□□□□ -0.59
LCA5-202ENST00000392959 APCSP02743 223 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 CD3EP07766 207 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 MFAP2P55001 183 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 CXorf66Q5JRM2 361 aaPredicted RBP11.38□□□□□ -0.59
LCA5-202ENST00000392959 IL17BQ9UHF5 180 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 HKR1P10072 659 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 CD99P14209 185 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 DCAF10Q5QP82 559 aa11.38□□□□□ -0.59
LCA5-202ENST00000392959 SLC25A47Q6Q0C1 308 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms