RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 NGFP01138 241 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 IGHV3-43DP0DP04 118 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 RND3P61587 244 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 POLDIP2Q9Y2S7 368 aa16.31■□□□□ 0.2
CSPG5-202ENST00000383738 C9JQL5 133 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 PTBP3O95758 552 aaKnown RBP16.3■□□□□ 0.2
CSPG5-202ENST00000383738 KRASP01116 189 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 UNC119Q13432 240 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 KHDC3LQ587J8 217 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 SF3B5Q9BWJ5 86 aaKnown RBP16.3■□□□□ 0.2
CSPG5-202ENST00000383738 PSENENQ9NZ42 101 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 CACFD1Q9UGQ2 172 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 PINLYPA6NC86 204 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 HSPB2A8KAH6 182 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 THBS4P35443 961 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 SNCAP37840 140 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 GNG3P63215 75 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 HSPB2Q16082 182 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 PIGYQ3MUY2 71 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 FAM78BQ5VT40 261 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 WISP1O95388 367 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 ZNF883P0CG24 379 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 PMCHP20382 165 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 IGLV3-12A0A075B6K2 115 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 M0R143 59 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 HIST1H3AP68431 136 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 PNLIPRP3Q17RR3 467 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 CXorf66Q5JRM2 361 aaPredicted RBP16.3■□□□□ 0.2
CSPG5-202ENST00000383738 TPRX1Q8N7U7 411 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 RPH3ALQ9UNE2 315 aa16.3■□□□□ 0.2
CSPG5-202ENST00000383738 E9PQ18 207 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 SH2D1BO14796 132 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 ERVK-16P61578 105 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 LSM6P62312 80 aaKnown RBP16.29■□□□□ 0.2
CSPG5-202ENST00000383738 MAP1LC3B2A6NCE7 125 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 SELEP16581 610 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 KITLGP21583 273 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 IQCJQ1A5X6 159 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 BMPERQ8N8U9 685 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 MAP1LC3BQ9GZQ8 125 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 TRAPPC1Q9Y5R8 145 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 DHRS7CA6NNS2 312 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 TCF21O43680 179 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 SNRPCP09234 159 aaKnown RBP16.29■□□□□ 0.2
CSPG5-202ENST00000383738 MZT1Q08AG7 82 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 SNAI3Q3KNW1 292 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 SLC25A40Q8TBP6 338 aa16.29■□□□□ 0.2
CSPG5-202ENST00000383738 C3orf85A0A1B0GTC6 90 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 EFNA2O43921 213 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 OR10A7Q8NGE5 316 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 ABHD17AQ96GS6 310 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 AQP10Q96PS8 301 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 TMEM204Q9BSN7 226 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 EGLN1Q9GZT9 426 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 POMT1Q9Y6A1 747 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 C5orf52A6NGY3 159 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 P2RY1P47900 373 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 SRPXP78539 464 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 ATP5SQ99766 215 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 TP53TG5Q9Y2B4 290 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 ANKHD1Q8IWZ3 2542 aaKnown RBP16.28■□□□□ 0.2
CSPG5-202ENST00000383738 A0A1W2PRD5 423 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 A0A1W2PRF3 423 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 A0A1W2PRM7 423 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 ECI1P42126 302 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 VAMP3Q15836 100 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 PYY3Q5JQD4 70 aa16.28■□□□□ 0.2
CSPG5-202ENST00000383738 OR8U8P0C7N1 319 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 FAM3BP58499 235 aaPredicted RBP16.27■□□□□ 0.2
CSPG5-202ENST00000383738 ENDOGQ14249 297 aaKnown RBP16.27■□□□□ 0.2
CSPG5-202ENST00000383738 TMEM241Q24JQ0 296 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 AQP3Q92482 292 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 SIRT7Q9NRC8 400 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 COL4A3Q01955 1670 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 CCL21O00585 134 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 SEC11BP0C7V7 166 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 CEACAM1P13688 526 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 FUT3P21217 361 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 RPS23P62266 143 aaKnown RBP16.27■□□□□ 0.2
CSPG5-202ENST00000383738 C1QL2Q7Z5L3 287 aa16.27■□□□□ 0.2
CSPG5-202ENST00000383738 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 A8MXE2 369 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 DPPA3Q6W0C5 159 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 CLEC18AA5D8T8 446 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 SPINT2O43291 252 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 ZNF737O75373 536 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 CCL8P80075 99 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 ZNF124Q15973 351 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 FAM214BQ7L5A3 538 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 CLEC18CQ8NCF0 446 aa16.27■□□□□ 0.19
CSPG5-202ENST00000383738 ERRFI1Q9UJM3 462 aaPredicted RBP16.27■□□□□ 0.19
CSPG5-202ENST00000383738 LRRC30A6NM36 301 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 BSXQ3C1V8 233 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 SSX7Q7RTT5 188 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 DEDDO75618 318 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 HES1Q14469 280 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 FAM27BQ5VT28 67 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 ADGRG7Q96K78 797 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 CACNG5Q9UF02 275 aa16.26■□□□□ 0.19
CSPG5-202ENST00000383738 A0A1B0GTI1 187 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms