RNA–Protein interactions for RNA: ENST00000380871.4

NKX3-1-201, Transcript of NK3 homeobox 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NKX3-1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-201ENST00000380871 ZNF391Q9UJN7 358 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 ESPL1Q14674 2120 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 NKX2-8O15522 239 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 TUSC2O75896 110 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 IAPPP10997 89 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 MDKP21741 143 aaPredicted RBP13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 FGF12P61328 243 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 RAB11AP62491 216 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 OR2B11Q5JQS5 317 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 ZNF506Q5JVG8 444 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 RNFT1Q5M7Z0 435 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 LCN15Q6UWW0 184 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 PRR18Q8N4B5 295 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 LINC00469Q8N7U9 141 aa13.84□□□□□ -0.19
NKX3-1-201ENST00000380871 C4orf17Q53FE4 359 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 SLC25A24Q6NUK1 477 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 PCSK4Q6UW60 755 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF610Q8N9Z0 462 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 GPR146Q96CH1 333 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 TRIP6Q15654 476 aaKnown RBP13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 KIAA2026Q5HYC2 2103 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 RIPPLY2Q5TAB7 128 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 TVP23CQ96ET8 276 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 SSX3Q99909 188 aa13.83□□□□□ -0.2
NKX3-1-201ENST00000380871 HSPB1P04792 205 aaKnown RBP13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 SOD3P08294 240 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 CDX1P47902 265 aaPredicted RBP13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 PLP2Q04941 152 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 ARL16Q0P5N6 197 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 GNPNAT1Q96EK6 184 aaPredicted RBP13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 REPIN1Q9BWE0 567 aaKnown RBP13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 RPRMQ9NS64 109 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 OR1A1Q9P1Q5 309 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 ZFHX2Q9C0A1 2572 aaPredicted RBP13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 ARHGAP21Q5T5U3 1957 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 C21orf140B9A014 251 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 TAS2R30P59541 319 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 OR10D4PQ8NGN7 298 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 OR1K1Q8NGR3 316 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 GPR61Q9BZJ8 451 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 PRDM14Q9GZV8 571 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 SMDT1Q9H4I9 107 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 CLEC18AA5D8T8 446 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 LY86O95711 162 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 METTL15P1P0C7V9 234 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF726P1Q15940 193 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 OR2T2Q6IF00 324 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 COLCA1Q6ZS62 124 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 LURAP1LQ8IV03 231 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 CLEC18CQ8NCF0 446 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 ERRFI1Q9UJM3 462 aaPredicted RBP13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 ATP23Q9Y6H3 246 aa13.82□□□□□ -0.2
NKX3-1-201ENST00000380871 ZFHX4Q86UP3 3567 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 BTBD17A6NE02 478 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 KLRC4-KLRK1H3BQV0 150 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 CD46P15529 392 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 F2RP25116 425 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 ZDHHC23Q8IYP9 409 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF383Q8NA42 475 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 MRPL30Q8TCC3 161 aaKnown RBP13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 HIST1H2AAQ96QV6 131 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 UNKLQ9H9P5 680 aaKnown RBP13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 H0Y980 276 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 TRAPPC2LH3BP13 241 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 TLE4Q04727 773 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 BAXQ07812 192 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 PLA2G2CQ5R387 149 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 FAM90A2PQ658T7 463 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 Q8NFD4 153 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 OR5D13Q8NGL4 314 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 RNASE11Q8TAA1 199 aaKnown RBP13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 FER1L6-AS2Q96M78 137 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 MED12LQ86YW9 2145 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 OTOGLQ3ZCN5 2332 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 LOC102723971A0A1B0GUV8 181 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 KIAA1324LA8MWY0 1029 aaPredicted RBP13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 IGKV1-39P01597 117 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 IGKV1D-39P04432 117 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 GLIPR1P48060 266 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 OR8G5Q8NG78 346 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 CACNG5Q9UF02 275 aa13.81□□□□□ -0.2
NKX3-1-201ENST00000380871 DSPP15924 2871 aaKnown RBP13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 CD200P41217 278 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 Q6ZS49 121 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 STX12Q86Y82 276 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 GAR1Q9NY12 217 aaKnown RBP13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 KLF13Q9Y2Y9 288 aaPredicted RBP13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 ICE1Q9Y2F5 2266 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 A0A087WWC5 75 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 TRAV24A0A0B4J272 114 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 RHBDL1O75783 438 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 SELEP16581 610 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 HLA-DRB3P79483 266 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 CEACAM21Q3KPI0 293 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF766Q5HY98 468 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 FRZBQ92765 325 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 TECTBQ96PL2 329 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 PPP1R3CQ9UQK1 317 aa13.8□□□□□ -0.2
NKX3-1-201ENST00000380871 SERPINE2P07093 398 aa13.79□□□□□ -0.2
NKX3-1-201ENST00000380871 ZNF16P17020 682 aaPredicted RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms