RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 UBAC2Q8NBM4 344 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 GPR61Q9BZJ8 451 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 OPN3Q9H1Y3 402 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 SH3BGRL3Q9H299 93 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 RFNGQ9Y644 331 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 CEP250Q9BV73 2442 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 DMXL2Q8TDJ6 3036 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 PRR33A8MZF0 331 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 DNASE2O00115 360 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 TM4SF5O14894 197 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 TXNL1O43396 289 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 WDR1O75083 606 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 TNFSF13O75888 250 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 ATG12O94817 140 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 ACAA1P09110 424 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 MUC1P15941 1255 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 UCP1P25874 307 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 FHITP49789 147 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 EIF5AP63241 154 aaKnown RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 OR8G1Q15617 311 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 IZUMO4Q1ZYL8 232 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 NMSQ5H8A3 153 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF497Q6ZNH5 498 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 SEM1Q6ZVN7 128 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 C11orf53Q8IXP5 236 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 OR51H1Q8NH63 302 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 SARAFQ96BY9 339 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 SAT2Q96F10 170 aaPredicted RBP6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 BOD1Q96IK1 185 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 CABLES2Q9BTV7 478 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 TLNRD1Q9H1K6 362 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 RHOFQ9HBH0 211 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 OBP2BQ9NPH6 170 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 OR14J1Q9UGF5 321 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 GLS2Q9UI32 602 aa6.73□□□□□ -1.33
PDLIM5-204ENST00000380176 MED19A0JLT2 244 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 PSPNO60542 156 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 TMEM50AO95807 157 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 CECR9P0C854 216 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 NKX2-1P43699 371 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 HOXA1P49639 335 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 TESK1Q15569 626 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 FAM53AQ6NSI3 398 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 BTNL8Q6UX41 500 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 Q6ZRG5 221 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 ODF3L1Q8IXM7 274 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 PUSL1Q8N0Z8 303 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 STARD4Q96DR4 205 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 ARV1Q9H2C2 271 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 TREM1Q9NP99 234 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 SPTBN2O15020 2390 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 RP1L1Q8IWN7 2480 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 IGSF23A1L1A6 192 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 C9JQL5 133 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 F8W036 122 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 K7EM74 188 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 SSSCA1O60232 199 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 CEACAM4O75871 244 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 C1QL1O75973 258 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 OR8U9P0C7N5 309 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 PSG2P11465 335 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 OMGP23515 440 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 F2RP25116 425 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 FABP6P51161 128 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 SRPXP78539 464 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 EWSR1Q01844 656 aaKnown RBP eCLIP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF146Q15072 292 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 ZNF674Q2M3X9 581 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 SAPCD1Q5SSQ6 148 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 GPR157Q5UAW9 335 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 Q6ZR03 302 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 CMTM1Q8IZ96 169 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 RPRMLQ8N4K4 120 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 OR8U1Q8NH10 309 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 TSNAXQ99598 290 aaKnown RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 NKX6-2Q9C056 277 aaPredicted RBP6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 MSL2Q9HCI7 577 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 PLSCR4Q9NRQ2 329 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 UQCC1Q9NVA1 299 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 TRAPPC2LQ9UL33 140 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 POLDIP2Q9Y2S7 368 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 ICE1Q9Y2F5 2266 aa6.72□□□□□ -1.33
PDLIM5-204ENST00000380176 CGAP01215 116 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 CAV2P51636 162 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 GNMTQ14749 295 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 PRAMEF6Q5VXH4 476 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 EIF5AL1Q6IS14 154 aaKnown RBP6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 IL34Q6ZMJ4 242 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 HSD17B11Q8NBQ5 300 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 OR8G5Q8NG78 346 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 OR10V1Q8NGI7 309 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 OR5D13Q8NGL4 314 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 UFSP2Q9NUQ7 469 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 TAAR3PQ9P1P4 343 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 PURGQ9UJV8 347 aaKnown RBP6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 USF3Q68DE3 2245 aa6.71□□□□□ -1.33
PDLIM5-204ENST00000380176 MAP1BP46821 2468 aaKnown RBP6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 IGHV1-18A0A0C4DH31 117 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 H0Y980 276 aa6.71□□□□□ -1.34
PDLIM5-204ENST00000380176 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms