RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 NCBP2LA6PVI3 153 aaKnown RBP13.06□□□□□ -0.32
NPHP4-201ENST00000378156 SEC11BP0C7V7 166 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 GZMHP20718 246 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF260Q3ZCT1 412 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 MSL2Q9HCI7 577 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 IL17BQ9UHF5 180 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 NAAAQ02083 359 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 DHRS11Q6UWP2 260 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 OR10G8Q8NGN5 311 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF519Q8TB69 540 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 RGP1Q92546 391 aaPredicted RBP13.06□□□□□ -0.32
NPHP4-201ENST00000378156 ATP5SQ99766 215 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 LPAR5Q9H1C0 372 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 ERVS71-1P61550 626 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 DLK1P80370 383 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF253O75346 499 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 CA11O75493 328 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 PPYP01298 95 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 STAG3L2P0CL84 134 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 HTR1DP28221 377 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 SLC25A47Q6Q0C1 308 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 SNX22Q96L94 193 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 MS4A5Q9H3V2 200 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 RNF7Q9UBF6 113 aa13.06□□□□□ -0.32
NPHP4-201ENST00000378156 LNP1A1A4G5 178 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF660Q6AZW8 331 aaPredicted RBP13.05□□□□□ -0.32
NPHP4-201ENST00000378156 LYZL2Q7Z4W2 148 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 HOGA1Q86XE5 327 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 SLC2A9Q9NRM0 540 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 SIGLEC5O15389 551 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 FGF2P09038 288 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 COX7A1P24310 79 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 ETV3LQ6ZN32 361 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 OR5AU1Q8NGC0 362 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 SLC25A22Q9H936 323 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 TMEM167BQ9NRX6 74 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 GPR179Q6PRD1 2367 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 NPIPB9F8W1W9 429 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 PRRX1P54821 245 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 MRPS11P82912 194 aaKnown RBP13.05□□□□□ -0.32
NPHP4-201ENST00000378156 HLA-DRB5Q30154 266 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 C1orf100Q5SVJ3 147 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 RNF2Q99496 336 aa13.05□□□□□ -0.32
NPHP4-201ENST00000378156 OOEPA6NGQ2 149 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 VDAC1P21796 283 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 UBE2V2Q15819 145 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 TMEM65Q6PI78 240 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 PRR7Q8TB68 274 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 FAM87AP0C7U9 286 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 SMIM17P0DL12 118 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 P2RY6Q15077 328 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 MRGPRGQ86SM5 289 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 TBC1D26Q86UD7 250 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 ZDHHC16Q969W1 377 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 ADTRPQ96IZ2 230 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 TREM2Q9NZC2 230 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 AHRRA9YTQ3 701 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF207O43670 478 aaKnown RBP13.04□□□□□ -0.32
NPHP4-201ENST00000378156 TEX30Q5JUR7 227 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 SH2D2AQ9NP31 389 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF273Q14593 569 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 CDCP2Q5VXM1 449 aa13.04□□□□□ -0.32
NPHP4-201ENST00000378156 H3BQ15 152 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 DEDDO75618 318 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 CDS2O95674 445 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 ISG15P05161 165 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 ACAA1P09110 424 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-201ENST00000378156 DAOP14920 347 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 KIR2DS2P43631 304 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 RPL24P83731 157 aaKnown RBP13.03□□□□□ -0.32
NPHP4-201ENST00000378156 TMEM255AQ5JRV8 349 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 NSUN5P2Q63ZY6 315 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 DPF1Q92782 380 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 ZNF552Q9H707 407 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-201ENST00000378156 K7ERU9 68 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 SYNGR2O43760 224 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 OR2J3O76001 311 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 SLC25A5P05141 298 aaKnown RBP13.03□□□□□ -0.32
NPHP4-201ENST00000378156 PMELP40967 661 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 RPS11P62280 158 aaKnown RBP eCLIP13.03□□□□□ -0.32
NPHP4-201ENST00000378156 APCDD1LQ8NCL9 501 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 NPDC1Q9NQX5 325 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-201ENST00000378156 LHFPL6Q9Y693 200 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 KRTCAP3Q53RY4 240 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 RIPPLY2Q5TAB7 128 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 ZSWIM8A7E2V4 1837 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 TMEM210A6NLX4 147 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 M0R2Z0 102 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 HOXD4P09016 255 aaPredicted RBP13.03□□□□□ -0.32
NPHP4-201ENST00000378156 DYNLT3P51808 116 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 ACSM6Q6P461 480 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 GAPTQ8N292 157 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 OR4F17Q8NGA8 305 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 OR4S2Q8NH73 311 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 STARD4Q96DR4 205 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 MGAMO43451 1857 aa13.03□□□□□ -0.32
NPHP4-201ENST00000378156 PRR33A8MZF0 331 aa13.02□□□□□ -0.32
NPHP4-201ENST00000378156 SPINK4O60575 86 aa13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms