RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 C1orf174Q8IYL3 243 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 OR8U1Q8NH10 309 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 GINS3Q9BRX5 216 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 PARP12Q9H0J9 701 aaKnown RBP17.04■□□□□ 0.32
VSX1-202ENST00000376709 C11orf1Q9H5F2 150 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 FAM96BQ9Y3D0 163 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 FAM215AQ9Y5M1 114 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 F8W036 122 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 IGLV2-14P01704 120 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 ID4P47928 161 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 AKR1E2Q96JD6 320 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 TLNRD1Q9H1K6 362 aa17.04■□□□□ 0.32
VSX1-202ENST00000376709 LYRM2Q9NU23 88 aaPredicted RBP17.04■□□□□ 0.32
VSX1-202ENST00000376709 CRYABP02511 175 aaKnown RBP17.03■□□□□ 0.32
VSX1-202ENST00000376709 HEXAP06865 529 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 OMGP23515 440 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 LMO1P25800 156 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 ZNF83P51522 516 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 ID3Q02535 119 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 PUSL1Q8N0Z8 303 aaKnown RBP17.03■□□□□ 0.32
VSX1-202ENST00000376709 RPRMLQ8N4K4 120 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 FAM169BQ8N8A8 192 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 HSD17B11Q8NBQ5 300 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 SLC25A31Q9H0C2 315 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 PLEKHF2Q9H8W4 249 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 APC2O95996 2303 aa17.03■□□□□ 0.32
VSX1-202ENST00000376709 BSNQ9UPA5 3926 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 IGSF23A1L1A6 192 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 AGPAT2O15120 278 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 SPP1P10451 314 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 ZNF16P17020 682 aaPredicted RBP17.02■□□□□ 0.32
VSX1-202ENST00000376709 AESQ08117 197 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 CLINT1Q14677 625 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 SMIM21Q3B7S5 101 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 S100PBPQ96BU1 408 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 UQCC1Q9NVA1 299 aa17.02■□□□□ 0.32
VSX1-202ENST00000376709 C1QTNF9BB2RNN3 333 aa17.02■□□□□ 0.31
VSX1-202ENST00000376709 MUC1P15941 1255 aaPredicted RBP17.02■□□□□ 0.31
VSX1-202ENST00000376709 EIF2S3LQ2VIR3 472 aaKnown RBP17.02■□□□□ 0.31
VSX1-202ENST00000376709 C1orf185Q5T7R7 199 aa17.02■□□□□ 0.31
VSX1-202ENST00000376709 BTNL8Q6UX41 500 aa17.02■□□□□ 0.31
VSX1-202ENST00000376709 SVBPQ8N300 66 aa17.02■□□□□ 0.31
VSX1-202ENST00000376709 GALMQ96C23 342 aa17.02■□□□□ 0.31
VSX1-202ENST00000376709 SH3BGRL3Q9H299 93 aa17.02■□□□□ 0.31
VSX1-202ENST00000376709 LIN7CQ9NUP9 197 aaKnown RBP17.02■□□□□ 0.31
VSX1-202ENST00000376709 DUSP13Q9UII6 198 aa17.02■□□□□ 0.31
VSX1-202ENST00000376709 M0R1B8 84 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 PTBP3O95758 552 aaKnown RBP17.01■□□□□ 0.31
VSX1-202ENST00000376709 GABRA2P47869 451 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 OR3A1P47881 315 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 MZT1Q08AG7 82 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 ZNF266Q14584 549 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 ZNF474Q6S9Z5 364 aaPredicted RBP17.01■□□□□ 0.31
VSX1-202ENST00000376709 TMEM252Q8N6L7 170 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 OR2Z1Q8NG97 314 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 A0A0G2JRQ6 117 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 A0A1B0GU03 582 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 CHST1O43916 411 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 F12P00748 615 aaPredicted RBP17.01■□□□□ 0.31
VSX1-202ENST00000376709 WNT2P09544 360 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 IL2RGP31785 369 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 ZNF616Q08AN1 781 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 TIMM23BQ5SRD1 257 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 SLC35E4Q6ICL7 350 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 OR1L1Q8NH94 360 aa17.01■□□□□ 0.31
VSX1-202ENST00000376709 RP1L1Q8IWN7 2480 aaPredicted RBP17■□□□□ 0.31
VSX1-202ENST00000376709 OOEPA6NGQ2 149 aa17■□□□□ 0.31
VSX1-202ENST00000376709 C12orf77C9JDV5 145 aa17■□□□□ 0.31
VSX1-202ENST00000376709 MKRN2OSH3BPM6 223 aa17■□□□□ 0.31
VSX1-202ENST00000376709 TRIM77I1YAP6 450 aa17■□□□□ 0.31
VSX1-202ENST00000376709 PITX3O75364 302 aa17■□□□□ 0.31
VSX1-202ENST00000376709 PRH1P02810 166 aa17■□□□□ 0.31
VSX1-202ENST00000376709 TFF1P04155 84 aa17■□□□□ 0.31
VSX1-202ENST00000376709 DANCRP0C864 163 aa17■□□□□ 0.31
VSX1-202ENST00000376709 PRR7Q8TB68 274 aa17■□□□□ 0.31
VSX1-202ENST00000376709 GPR146Q96CH1 333 aa17■□□□□ 0.31
VSX1-202ENST00000376709 SCNM1Q9BWG6 230 aa17■□□□□ 0.31
VSX1-202ENST00000376709 MMP9P14780 707 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 CAMLGP49069 296 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 C10orf91Q5T1B1 145 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 SPAG16Q8N0X2 631 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 DRAM1Q8N682 238 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 LRRC29Q8WV35 223 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 MUCL1Q96DR8 90 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 WASF3Q9UPY6 502 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 CARHSP1Q9Y2V2 147 aaKnown RBP16.99■□□□□ 0.31
VSX1-202ENST00000376709 CHD3Q12873 2000 aaKnown RBP16.99■□□□□ 0.31
VSX1-202ENST00000376709 CST7O76096 145 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 TMEM50AO95807 157 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 TSPAN15O95858 294 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 SLC25A6P12236 298 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 COL10A1Q03692 680 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 OR5C1Q8NGR4 320 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 NINJ1Q92982 152 aa16.99■□□□□ 0.31
VSX1-202ENST00000376709 RNASEK-C17orf49H0YIS7 233 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 CRYAAP02489 173 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 TIMP3P35625 211 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 IZUMO4Q1ZYL8 232 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 KRBOX4Q5JUW0 171 aa16.98■□□□□ 0.31
VSX1-202ENST00000376709 TMEM217Q8N7C4 229 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms