RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 Q8N9W7 124 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 OR4K15Q8NH41 348 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 NRG4Q8WWG1 115 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 BANF2Q9H503 90 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 PEX16Q9Y5Y5 336 aa16.58■□□□□ 0.24
VSX1-201ENST00000376707 PTGES3LE9PB15 166 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 SLC31A2O15432 143 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 TXNL1O43396 289 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 CRTAPO75718 401 aaPredicted RBP16.57■□□□□ 0.24
VSX1-201ENST00000376707 GP2P55259 537 aaKnown RBP16.57■□□□□ 0.24
VSX1-201ENST00000376707 INSL4Q14641 139 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 SPHARQ15513 63 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 SIGIRRQ6IA17 410 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 TRAT1Q6PIZ9 186 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 SLC25A48Q6ZT89 311 aaKnown RBP16.57■□□□□ 0.24
VSX1-201ENST00000376707 OR10V1Q8NGI7 309 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 PHYHIPQ92561 330 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 RASL11BQ9BPW5 248 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 GON7Q9BXV9 100 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 SCN3BQ9NY72 215 aa16.57■□□□□ 0.24
VSX1-201ENST00000376707 H0YHG0 523 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 HBZP02008 142 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 FUT3P21217 361 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 AQP4P55087 323 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 GABPB1Q06547 395 aaPredicted RBP16.56■□□□□ 0.24
VSX1-201ENST00000376707 GPR50Q13585 617 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 IRF3Q14653 427 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 PNLIPRP3Q17RR3 467 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 LRRTM1Q86UE6 522 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 ZNF439Q8NDP4 499 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 OR8H1Q8NGG4 311 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 OR1L1Q8NH94 360 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 S1PR3Q99500 378 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 P2RX4Q99571 388 aa16.56■□□□□ 0.24
VSX1-201ENST00000376707 ZNF736B4DX44 427 aaPredicted RBP16.55■□□□□ 0.24
VSX1-201ENST00000376707 RRP9O43818 475 aaKnown RBP16.55■□□□□ 0.24
VSX1-201ENST00000376707 UBBP0CG47 229 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 CD37P11049 281 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 RCC1P18754 421 aaPredicted RBP16.55■□□□□ 0.24
VSX1-201ENST00000376707 ZNF137PP52743 207 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 CT45A1Q5HYN5 189 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 FAM27D1Q5T7N8 215 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 CT45A3Q8NHU0 189 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 CST11Q9H112 138 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 DUSP21Q9H596 190 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 PLSCR3Q9NRY6 295 aa16.55■□□□□ 0.24
VSX1-201ENST00000376707 MBNL3Q9NUK0 354 aaKnown RBP16.55■□□□□ 0.24
VSX1-201ENST00000376707 UBE2QL1A1L167 161 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 PDCD6O75340 191 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 RPLP1P05386 114 aaKnown RBP16.54■□□□□ 0.24
VSX1-201ENST00000376707 VHLP40337 213 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 ZNF134P52741 427 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 RAB25P57735 213 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 CXorf66Q5JRM2 361 aaPredicted RBP16.54■□□□□ 0.24
VSX1-201ENST00000376707 C1orf100Q5SVJ3 147 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 STEAP3Q658P3 488 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 ZNF554Q86TJ5 538 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 FAM46BQ96A09 425 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 DUX3Q96PT4 197 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 TMED9Q9BVK6 235 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 TAF9BQ9HBM6 251 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 KCNIP1Q9NZI2 227 aa16.54■□□□□ 0.24
VSX1-201ENST00000376707 CCL24O00175 119 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 MYF6P23409 242 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 MED22Q15528 200 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 VAX1Q5SQQ9 334 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 GLT8D1Q68CQ7 371 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 RAX2Q96IS3 184 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 OR2S2Q9NQN1 319 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 ZMAT5Q9UDW3 170 aaKnown RBP16.53■□□□□ 0.24
VSX1-201ENST00000376707 TPRKBQ9Y3C4 175 aa16.53■□□□□ 0.24
VSX1-201ENST00000376707 UCHL1P09936 223 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 SRMP19623 302 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 SOX6P35712 828 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 FOXE3Q13461 319 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 LCNL1Q6ZST4 164 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 CEACAM19Q7Z692 300 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 FAM71E2Q8N5Q1 922 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 MRPL30Q8TCC3 161 aaKnown RBP16.52■□□□□ 0.24
VSX1-201ENST00000376707 HSPB9Q9BQS6 159 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 ANKRD60Q9BZ19 345 aa16.52■□□□□ 0.24
VSX1-201ENST00000376707 LANCL1O43813 399 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 ELANEP08246 267 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 VSIG8P0DPA2 414 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 VDAC1P21796 283 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 F2RL1P55085 397 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 RPS27AP62979 156 aaKnown RBP16.51■□□□□ 0.23
VSX1-201ENST00000376707 CD69Q07108 199 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 TPBGQ13641 420 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 MORN2Q502X0 79 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 HSD17B12Q53GQ0 312 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 RBM48Q5RL73 367 aaKnown RBP16.51■□□□□ 0.23
VSX1-201ENST00000376707 OR8U1Q8NH10 309 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 UFD1Q92890 307 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 RBMXL1Q96E39 390 aaKnown RBP16.51■□□□□ 0.23
VSX1-201ENST00000376707 CYYR1Q96J86 154 aa16.51■□□□□ 0.23
VSX1-201ENST00000376707 SLC22A1O15245 554 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 CHATP28329 748 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 LSAMPQ13449 338 aa16.5■□□□□ 0.23
VSX1-201ENST00000376707 DCTN2Q13561 401 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms