RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 WFDC9Q8NEX5 89 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 OR4K15Q8NH41 348 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 MRGPRDQ8TDS7 321 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 WIPF2Q8TF74 440 aaPredicted RBP9.78□□□□□ -0.84
LSM2-208ENST00000375661 C17orf50Q8WW18 174 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 RAB3CQ96E17 227 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 ABCG5Q9H222 651 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 HEXA-AS1Q9H8Q6 139 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 ZNF702PQ9H963 129 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 SERTAD4Q9NUC0 356 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 COMMD3Q9UBI1 195 aa9.78□□□□□ -0.84
LSM2-208ENST00000375661 RSL24D1Q9UHA3 163 aaKnown RBP9.78□□□□□ -0.84
LSM2-208ENST00000375661 KBTBD11-OT1A0A1B0GTJ5 212 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 CCDC160A6NGH7 325 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 ZNF729A6NN14 1252 aaPredicted RBP9.77□□□□□ -0.85
LSM2-208ENST00000375661 NPIPB11E5RHQ5 1161 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 C15orf65H3BRN8 121 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 ZNF701M0R085 212 aaPredicted RBP9.77□□□□□ -0.85
LSM2-208ENST00000375661 CHST1O43916 411 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 NAPSAO96009 420 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 RBP4P02753 201 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 IGHV1-8P0DP01 117 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 CD28P10747 220 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 HIST1H1DP16402 221 aaKnown RBP9.77□□□□□ -0.85
LSM2-208ENST00000375661 ZNF260Q3ZCT1 412 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 PRAMEF5Q5TYX0 476 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 BAIAP2L2Q6UXY1 529 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 ZNF782Q6ZMW2 699 aaPredicted RBP9.77□□□□□ -0.85
LSM2-208ENST00000375661 C5orf24Q7Z6I8 188 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 LYG1Q8N1E2 194 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 SAMD12Q8N8I0 201 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 ZNF565Q8N9K5 539 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 PIFOQ8TCI5 191 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 ACOT12Q8WYK0 555 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 HDHD3Q9BSH5 251 aaPredicted RBP9.77□□□□□ -0.85
LSM2-208ENST00000375661 GAL3ST2Q9H3Q3 398 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 LINC00574Q9H8X3 128 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 MBNL3Q9NUK0 354 aaKnown RBP9.77□□□□□ -0.85
LSM2-208ENST00000375661 CALYQ9NYX4 217 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 ELF5Q9UKW6 265 aaPredicted RBP9.77□□□□□ -0.85
LSM2-208ENST00000375661 TRAPPC2LQ9UL33 140 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 DSCAML1Q8TD84 2053 aa9.77□□□□□ -0.85
LSM2-208ENST00000375661 DNAH3Q8TD57 4116 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 A0A075B6Q4 140 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 TRBV6-6A0A0A6YYG2 114 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 SMIM31A0A1B0GVY4 71 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 hCG_1809904A0A1W2PP81 198 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 A0A1W2PPE2 198 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 A0A1W2PR64 198 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 A0A1W2PRV1 198 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 ADARB2-AS1A8MUL3 147 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 EIF4EP06730 217 aaKnown RBP9.76□□□□□ -0.85
LSM2-208ENST00000375661 RCC1P18754 421 aaPredicted RBP9.76□□□□□ -0.85
LSM2-208ENST00000375661 CD33P20138 364 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 GZMHP20718 246 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 CDK2P24941 298 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 SSTR5P35346 364 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 LGALS4P56470 323 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 CDNFQ49AH0 187 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 UBE2NLQ5JXB2 153 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 UTF1Q5T230 341 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 ZNF880Q6PDB4 577 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 HEPN1Q6WQI6 88 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 RFESDQ8TAC1 157 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 UBALD1Q8TB05 177 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 CMTM3Q96MX0 182 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 CITED2Q99967 270 aaPredicted RBP9.76□□□□□ -0.85
LSM2-208ENST00000375661 CMSS1Q9BQ75 279 aaKnown RBP9.76□□□□□ -0.85
LSM2-208ENST00000375661 PRSS22Q9GZN4 317 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 SLIRPQ9GZT3 109 aaKnown RBP9.76□□□□□ -0.85
LSM2-208ENST00000375661 WNT10AQ9GZT5 417 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 CCDC59Q9P031 241 aaKnown RBP9.76□□□□□ -0.85
LSM2-208ENST00000375661 PITPNC1Q9UKF7 332 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 TCF19Q9Y242 345 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 SESN1Q9Y6P5 492 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 KMT2CQ8NEZ4 4911 aaKnown RBP9.76□□□□□ -0.85
LSM2-208ENST00000375661 NBEAL2Q6ZNJ1 2754 aa9.76□□□□□ -0.85
LSM2-208ENST00000375661 A0A0A6YYH2 397 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 A6NJ64 397 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 C12orf77C9JDV5 145 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 ORC5O43913 435 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 HPGDSO60760 199 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 PEX14O75381 377 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 SCGNO76038 276 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 IZUMO1Q8IYV9 350 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 AP3S1Q92572 193 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 ARL11Q969Q4 196 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 S100A16Q96FQ6 103 aaKnown RBP9.75□□□□□ -0.85
LSM2-208ENST00000375661 KIRREL1Q96J84 757 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 OCSTAMPQ9BR26 566 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 RIMS4Q9H426 269 aaPredicted RBP9.75□□□□□ -0.85
LSM2-208ENST00000375661 IDI2-AS1Q9NZ38 188 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 NDUFA13Q9P0J0 144 aa9.75□□□□□ -0.85
LSM2-208ENST00000375661 TRAV18A0A075B6X5 111 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 TMEM235A6NFC5 223 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 SERPINE3A8MV23 424 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 K7EIL1 84 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 CTDSP2O14595 271 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 XRCC3O43542 346 aa9.74□□□□□ -0.85
LSM2-208ENST00000375661 DUS4LO95620 317 aaKnown RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms