RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 PSG5Q15238 335 aa10.02□□□□□ -0.81
PTCH1-203ENST00000375274 TMEM74BQ9NUR3 256 aa10.02□□□□□ -0.81
PTCH1-203ENST00000375274 MED12Q93074 2177 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 hADV38S2A0JD32 116 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 CBY3A6NI87 242 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 KLF3P57682 345 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-203ENST00000375274 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 EP300Q09472 2414 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-203ENST00000375274 TCAPO15273 167 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 IGKV3-11P04433 115 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 HIKESHIQ53FT3 197 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 LINC00596Q86U02 117 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 OR5AU1Q8NGC0 362 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 H0Y980 276 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 MKRN2OSH3BPM6 223 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 ZNF708P17019 499 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 FAM3BP58499 235 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-203ENST00000375274 MEF2BQ02080 365 aaPredicted RBP10.01□□□□□ -0.81
PTCH1-203ENST00000375274 CLN8Q9UBY8 286 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 MSGN1A6NI15 193 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 HLA-DRB5Q30154 266 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 POC1AQ8NBT0 407 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 SGMS2Q8NHU3 365 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 MISP3Q96FF7 219 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 ABHD14BQ96IU4 210 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 WDR61Q9GZS3 305 aaKnown RBP10.01□□□□□ -0.81
PTCH1-203ENST00000375274 LCTP09848 1927 aa10.01□□□□□ -0.81
PTCH1-203ENST00000375274 ANKRD36A6QL64 1941 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 NPIPB13A6NJU9 1138 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 NPIPB4C9JG80 1138 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 DANCRP0C864 163 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 FAM157CP0CG43 387 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 FHITP49789 147 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 CEACAM21Q3KPI0 293 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 FAM209BQ5JX69 171 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 ETFRF1Q6IPR1 90 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 LRP11Q86VZ4 500 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 BLNKQ8WV28 456 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 HIST1H2BAQ96A08 127 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 OR51M1Q9H341 326 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 SRD5A3Q9H8P0 318 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 A0A1W2PN81 502 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 PTTG1IPP53801 180 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 RND3P61587 244 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 TNFAIP6P98066 277 aaPredicted RBP10□□□□□ -0.81
PTCH1-203ENST00000375274 UNC119Q13432 240 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 SLC23A3Q6PIS1 610 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 ATRAIDQ6UW56 229 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 C16orf82Q7Z2V1 217 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 OR52M1Q8NGK5 317 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 OR1L4Q8NGR5 311 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 Q96M66 194 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 SMOC1Q9H4F8 434 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 R4GN57 208 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 MDC1Q14676 2089 aaKnown RBP10□□□□□ -0.81
PTCH1-203ENST00000375274 J3QR89 54 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 ACTL6AO96019 429 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 RBP4P02753 201 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 ACAA1P09110 424 aaPredicted RBP10□□□□□ -0.81
PTCH1-203ENST00000375274 Q6ZN92 141 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 SLC25A40Q8TBP6 338 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 GAL3ST2Q9H3Q3 398 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 KCNMB2Q9Y691 235 aa10□□□□□ -0.81
PTCH1-203ENST00000375274 LOC105371267A0A1B0GV96 52 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 SNURFLB1AK76 121 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 CELA2AP08217 269 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 AESQ08117 197 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 GPHA2Q96T91 129 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 AAMDCQ9H7C9 122 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 BET1LQ9NYM9 111 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 GREB1Q4ZG55 1949 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 BRCA1P38398 1863 aaKnown RBP9.99□□□□□ -0.81
PTCH1-203ENST00000375274 ADAM11O75078 769 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 ORM2P19652 201 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 NPY1RP25929 384 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 HTR1DP28221 377 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 SNAI3Q3KNW1 292 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 FBXW9Q5XUX1 488 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 TIPARPQ7Z3E1 657 aaKnown RBP9.99□□□□□ -0.81
PTCH1-203ENST00000375274 VSTM2AQ8TAG5 236 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 OR2J1Q9GZK6 312 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 DUSP15Q9H1R2 295 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-203ENST00000375274 RNF222A6NCQ9 220 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 EIF3GO75821 320 aaKnown RBP eCLIP9.99□□□□□ -0.81
PTCH1-203ENST00000375274 OR10J1P30954 320 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 HIST3H3Q16695 136 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 MRPL54Q6P161 138 aaKnown RBP9.99□□□□□ -0.81
PTCH1-203ENST00000375274 PRSS3P2Q8NHM4 247 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 GPR61Q9BZJ8 451 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 HELTA6NFD8 242 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 MELTFP08582 738 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 USF1P22415 310 aaPredicted RBP9.99□□□□□ -0.81
PTCH1-203ENST00000375274 IER3P46695 156 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 GAS1P54826 345 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 DEFB123Q8N688 67 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 GLRX2Q9NS18 164 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 PAM16Q9Y3D7 125 aa9.99□□□□□ -0.81
PTCH1-203ENST00000375274 CRYABP02511 175 aaKnown RBP9.98□□□□□ -0.81
PTCH1-203ENST00000375274 SP1P08047 785 aa9.98□□□□□ -0.81
PTCH1-203ENST00000375274 LINC00114Q6XXX2 140 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms