RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 PPIFP30405 207 aaKnown RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF137PP52743 207 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 TMEM267Q0VDI3 215 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 GPR176Q14439 515 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 SLC22A6Q4U2R8 563 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 NHLRC3Q5JS37 347 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 SYT6Q5T7P8 510 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 ASPHD1Q5U4P2 390 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 PYHIN1Q6K0P9 492 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 LIN54Q6MZP7 749 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 FAM53AQ6NSI3 398 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 ACSM6Q6P461 480 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF497Q6ZNH5 498 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 TCTEX1D1Q8N7M0 179 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 GPR148Q8TDV2 347 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 TM2D3Q9BRN9 247 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 ALX4Q9H161 411 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 TMEM138Q9NPI0 162 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 OR2S2Q9NQN1 319 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 IL36GQ9NZH8 169 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 OAZ3Q9UMX2 235 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 STUB1Q9UNE7 303 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 FOXA2Q9Y261 457 aaPredicted RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 DYNC2H1Q8NCM8 4307 aaKnown RBP10.94□□□□□ -0.66
PTCH1-202ENST00000375271 BIRC6Q9NR09 4857 aa10.94□□□□□ -0.66
PTCH1-202ENST00000375271 SAC3D1A6NKF1 404 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 C12orf77C9JDV5 145 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 ARPC1BO15143 372 aaKnown RBP10.93□□□□□ -0.66
PTCH1-202ENST00000375271 HSPA12AO43301 675 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 RGS11O94810 467 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 IGLV1-40P01703 118 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 HBZP02008 142 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 MT-ND4P03905 459 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 ARSBP15848 533 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 C1orf146Q5VVC0 180 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 STEAP3Q658P3 488 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 OR4K15Q8NH41 348 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 IL17DQ8TAD2 202 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 ABHD14AQ9BUJ0 271 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 ANKRD60Q9BZ19 345 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 TUBA4BQ9H853 241 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 CKLFQ9UBR5 152 aa10.93□□□□□ -0.66
PTCH1-202ENST00000375271 HUWE1Q7Z6Z7 4374 aaKnown RBP10.93□□□□□ -0.66
PTCH1-202ENST00000375271 EPPK1P58107 5090 aaKnown RBP10.92□□□□□ -0.66
PTCH1-202ENST00000375271 IGHV4OR15-8A0A075B7B6 117 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 A0A087WW49 117 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 IGHV7-81A0A0B4J1V7 117 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 BDKRB2P30411 391 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 C5orf64Q2M2E5 130 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 CT45A1Q5HYN5 189 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 GTSCR1Q86UQ5 136 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 CT45A3Q8NHU0 189 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 TMEM106AQ96A25 262 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 LGALS12Q96DT0 336 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 MRPS24Q96EL2 167 aaKnown RBP10.92□□□□□ -0.66
PTCH1-202ENST00000375271 Q96MT0 163 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 TOLLIPQ9H0E2 274 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 ISG20L2Q9H9L3 353 aaKnown RBP10.92□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF581Q9P0T4 197 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 NKX1-2Q9UD57 310 aaPredicted RBP10.92□□□□□ -0.66
PTCH1-202ENST00000375271 EXOGQ9Y2C4 368 aaKnown RBP10.92□□□□□ -0.66
PTCH1-202ENST00000375271 LYSTQ99698 3801 aa10.92□□□□□ -0.66
PTCH1-202ENST00000375271 J3QRE1 110 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 IGHV3-11P01762 117 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 HSPB1P04792 205 aaKnown RBP10.91□□□□□ -0.66
PTCH1-202ENST00000375271 VEGFCP49767 419 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 TPPP2P59282 170 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 SNRPGP62308 76 aaKnown RBP10.91□□□□□ -0.66
PTCH1-202ENST00000375271 RIPK1Q13546 671 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 RAB12Q6IQ22 244 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 ASCL4Q6XD76 172 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 OR1L1Q8NH94 360 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 CENPNQ96H22 339 aaPredicted RBP10.91□□□□□ -0.66
PTCH1-202ENST00000375271 MRPL20Q9BYC9 149 aaKnown RBP10.91□□□□□ -0.66
PTCH1-202ENST00000375271 SACSQ9NZJ4 4579 aa10.91□□□□□ -0.66
PTCH1-202ENST00000375271 FAM90A10PA6NDY2 464 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 GSTP1P09211 210 aaKnown RBP10.9□□□□□ -0.66
PTCH1-202ENST00000375271 RASSF2P50749 326 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF134P52741 427 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 ACTBL2Q562R1 376 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 SLC25A30Q5SVS4 291 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF660Q6AZW8 331 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-202ENST00000375271 MINDY2Q8NBR6 621 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF439Q8NDP4 499 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 OR2AK2Q8NG84 335 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 CASTOR1Q8WTX7 329 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF184Q99676 751 aaPredicted RBP10.9□□□□□ -0.66
PTCH1-202ENST00000375271 TMED9Q9BVK6 235 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 EDA2RQ9HAV5 297 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 TAF9BQ9HBM6 251 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 ZNF355PQ9NSJ1 428 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 ERVK13-1Q9NX77 482 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 JPT1Q9UK76 154 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 GMPPBQ9Y5P6 360 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 PEX16Q9Y5Y5 336 aa10.9□□□□□ -0.66
PTCH1-202ENST00000375271 MAGEA13PA6NCF6 341 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 E9PI62 339 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 H0Y980 276 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 CA11O75493 328 aa10.89□□□□□ -0.67
PTCH1-202ENST00000375271 CIB2O75838 187 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms