RNA–Protein interactions for RNA: ENST00000374610.6

PFDN6-203, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-203ENST00000374610 ABCB10Q9NRK6 738 aa12.39□□□□□ -0.43
PFDN6-203ENST00000374610 SLC23A1Q9UHI7 598 aa12.39□□□□□ -0.43
PFDN6-203ENST00000374610 JPT1Q9UK76 154 aa12.39□□□□□ -0.43
PFDN6-203ENST00000374610 ELF5Q9UKW6 265 aaPredicted RBP12.39□□□□□ -0.43
PFDN6-203ENST00000374610 PSG11Q9UQ72 335 aa12.39□□□□□ -0.43
PFDN6-203ENST00000374610 HILPDAQ9Y5L2 63 aa12.39□□□□□ -0.43
PFDN6-203ENST00000374610 MINOS1-NBL1R4GNA1 71 aa12.39□□□□□ -0.43
PFDN6-203ENST00000374610 KIAA2026Q5HYC2 2103 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 A0A087X0M5 115 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 A0A1B0GX30 115 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 A0A1W2PPE3 182 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 DPPA5A6NC42 116 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 ODF3BA8MYP8 253 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 BET1O15155 118 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 FABP7O15540 132 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 LPLP06858 475 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 SCTP09683 121 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 CBX5P45973 191 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 HLA-DRB5Q30154 266 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 PLA1AQ53H76 456 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 LHFPL4Q7Z7J7 247 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 OR4A4PQ8NGN8 299 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 RPEQ96AT9 228 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 GINS4Q9BRT9 223 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 RBM38Q9H0Z9 239 aaKnown RBP12.38□□□□□ -0.43
PFDN6-203ENST00000374610 AUNIPQ9H7T9 357 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 DPM3Q9P2X0 92 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 EXTL2Q9UBQ6 330 aa12.38□□□□□ -0.43
PFDN6-203ENST00000374610 BUB1B-PAK6H3BSN5 160 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 TRIM77I1YAP6 450 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 HOXA3O43365 443 aaPredicted RBP12.37□□□□□ -0.43
PFDN6-203ENST00000374610 PRSS3P35030 304 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 PPP1CCP36873 323 aaKnown RBP12.37□□□□□ -0.43
PFDN6-203ENST00000374610 CEACAM6P40199 344 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 LOXL3P58215 753 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 ARPC4P59998 168 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 MADCAM1Q13477 382 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 MORN2Q502X0 79 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 Q6YL49 198 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 C5orf24Q7Z6I8 188 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 SNX29P2Q8IUI4 249 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 OR2AK2Q8NG84 335 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 OR4P4Q8NGL7 312 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 OR10J5Q8NHC4 309 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 C15orf40Q8WUR7 153 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 SSMEM1Q8WWF3 244 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 TOMM40LQ969M1 308 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 ZNF48Q96MX3 618 aaPredicted RBP12.37□□□□□ -0.43
PFDN6-203ENST00000374610 DUX5Q96PT3 197 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 OCSTAMPQ9BR26 566 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 TLN2Q9Y4G6 2542 aa12.37□□□□□ -0.43
PFDN6-203ENST00000374610 MEIS3P1A6NDR6 274 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 CTDSP2O14595 271 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 YPEL1O60688 119 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 GSTT2P0CG29 244 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 GSTT2BP0CG30 244 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 PTHLHP12272 177 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 S100A5P33763 92 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 HILS1P60008 231 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 GNMTQ14749 295 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 SRSF7Q16629 238 aaKnown RBP eCLIP12.36□□□□□ -0.43
PFDN6-203ENST00000374610 Q3ZCU0 254 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 CCDC144NLQ6NUI1 221 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 LAX1Q8IWV1 398 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 C17orf50Q8WW18 174 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 DIRAS2Q96HU8 199 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 YPEL2Q96QA6 119 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 SSX3Q99909 188 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 ZNRD1Q9P1U0 126 aa12.36□□□□□ -0.43
PFDN6-203ENST00000374610 RBM7Q9Y580 266 aaKnown RBP12.36□□□□□ -0.43
PFDN6-203ENST00000374610 DNAJC9-AS1A6NH13 148 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 IGLV1-47P01700 117 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 FCER2P06734 321 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 MELTFP08582 738 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 CTXN2P0C2S0 81 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 PAX6P26367 422 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 BRS3P32247 399 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 LRRC75BQ2VPJ9 315 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 LYG1Q8N1E2 194 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 EDARADDQ8WWZ3 215 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 ABHD14AQ9BUJ0 271 aa12.35□□□□□ -0.43
PFDN6-203ENST00000374610 SLIRPQ9GZT3 109 aaKnown RBP12.35□□□□□ -0.43
PFDN6-203ENST00000374610 SSX5O60225 188 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 RAB7AP51149 207 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 IL18Q14116 193 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 IGSF11Q5DX21 431 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 UTF1Q5T230 341 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 TPTE2P1Q5T6R2 138 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 FAM53AQ6NSI3 398 aaPredicted RBP12.34□□□□□ -0.43
PFDN6-203ENST00000374610 CNIH2Q6PI25 160 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 Q6ZPA2 131 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 LDLRAD3Q86YD5 345 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 BEST4Q8NFU0 473 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 OR5R1Q8NH85 324 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 MEGF9Q9H1U4 602 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 MMP27Q9H306 513 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 OR1A1Q9P1Q5 309 aa12.34□□□□□ -0.43
PFDN6-203ENST00000374610 POMT1Q9Y6A1 747 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms