RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MT-ND4LP03901 98 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 HOXB1P14653 301 aaPredicted RBP11.83□□□□□ -0.52
HMGCL-203ENST00000374490 CA6P23280 308 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 UBE2NP61088 152 aaKnown RBP11.83□□□□□ -0.52
HMGCL-203ENST00000374490 AWAT1Q58HT5 328 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF766Q5HY98 468 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 AKR1C8PQ5T2L2 129 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 FIP1L1Q6UN15 594 aaKnown RBP11.83□□□□□ -0.52
HMGCL-203ENST00000374490 P4HA3Q7Z4N8 544 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 OR5C1Q8NGR4 320 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 OR1J1Q8NGS3 322 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF488Q96MN9 340 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 C12orf49Q9H741 205 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 KIAA1456Q9P272 454 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 KALRNO60229 2985 aa11.83□□□□□ -0.52
HMGCL-203ENST00000374490 C7orf77A4D0Y5 90 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 RNF212BA8MTL3 300 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 M0R036 132 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 CHST1O43916 411 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 CNOT4O95628 575 aaKnown RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ACAA1P09110 424 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 WT1P19544 449 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 DYNLT3P51808 116 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 PPP1CBP62140 327 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF497Q6ZNH5 498 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 RNASE11Q8TAA1 199 aaKnown RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 RBMXL1Q96E39 390 aaKnown RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 C14orf79Q96F83 325 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 MAGT1Q9H0U3 335 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 DEFB127Q9H1M4 99 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ZDHHC11Q9H8X9 412 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 LIN7CQ9NUP9 197 aaKnown RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 TAAR3PQ9P1P4 343 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 SH2D1BO14796 132 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 SMPD2O60906 423 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 IFNA5P01569 189 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 RAC2P15153 192 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF14P17017 642 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 PTAFRP25105 342 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 PPP1CCP36873 323 aaKnown RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 FHITP49789 147 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 SULT1A1P50225 295 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 TAS2R30P59541 319 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ERVK11-1P61568 191 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 TLE4Q04727 773 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 C20orf204Q6ZNR8 217 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 FDCSPQ8NFU4 85 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 TMEM171Q8WVE6 324 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 GPR146Q96CH1 333 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 SPRR3Q9UBC9 169 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ERRFI1Q9UJM3 462 aaPredicted RBP11.82□□□□□ -0.52
HMGCL-203ENST00000374490 TRAPPC2LQ9UL33 140 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 RNF115Q9Y4L5 304 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 WIPI2Q9Y4P8 454 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 WSB1Q9Y6I7 421 aa11.82□□□□□ -0.52
HMGCL-203ENST00000374490 ASH1LQ9NR48 2969 aaKnown RBP11.81□□□□□ -0.52
HMGCL-203ENST00000374490 RBFOX3A6NFN3 312 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 IQCF6A8MYZ5 107 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 LILRA1O75019 489 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 SNRNP70P08621 437 aaKnown RBP11.81□□□□□ -0.52
HMGCL-203ENST00000374490 PGA5P0DJD9 388 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 TUBG1P23258 451 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 OMGP23515 440 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 C17orf78Q8N4C9 275 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 ZBTB34Q8NCN2 500 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 HIST1H2BAQ96A08 127 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 CLCC1Q96S66 551 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 TUBG2Q9NRH3 451 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 FBXO7Q9Y3I1 522 aa11.81□□□□□ -0.52
HMGCL-203ENST00000374490 SLC33A1O00400 549 aaPredicted RBP11.8□□□□□ -0.52
HMGCL-203ENST00000374490 ZNHIT1O43257 154 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 TXNL1O43396 289 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 TNFSF12O43508 249 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 RHBDL1O75783 438 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 OR2H2O95918 312 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 SFTPCP11686 197 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 TNFSF10P50591 281 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF146Q15072 292 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 AKIRIN2Q53H80 203 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 SOHLH1Q5JUK2 328 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 IQCF2Q8IXL9 164 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 ODF3L1Q8IXM7 274 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 ZNF561Q8N587 486 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 SCCPDHQ8NBX0 429 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 OR51H1Q8NH63 302 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 MBNL3Q9NUK0 354 aaKnown RBP11.8□□□□□ -0.52
HMGCL-203ENST00000374490 RNF150Q9ULK6 438 aa11.8□□□□□ -0.52
HMGCL-203ENST00000374490 TRAV1-1A0A0B4J248 108 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.79□□□□□ -0.52
HMGCL-203ENST00000374490 FAM90A26D6RGX4 464 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 CST7O76096 145 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 NXPH2O95156 264 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 TMEM50AO95807 157 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 HSPB1P04792 205 aaKnown RBP11.79□□□□□ -0.52
HMGCL-203ENST00000374490 OR8U8P0C7N1 319 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 PSG2P11465 335 aa11.79□□□□□ -0.52
HMGCL-203ENST00000374490 ASCL1P50553 236 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms