RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 ATG12O94817 140 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 CECR9P0C854 216 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 GCH1P30793 250 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 POLR2GP62487 172 aaKnown RBP eCLIP10.21□□□□□ -0.78
HMGCL-202ENST00000374487 P2RY6Q15077 328 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 OR2C3Q8N628 320 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 LILRB1Q8NHL6 650 aaPredicted RBP10.21□□□□□ -0.78
HMGCL-202ENST00000374487 BOD1Q96IK1 185 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 BCL2L14Q9BZR8 327 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 TMEM231Q9H6L2 316 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 ZDHHC8Q9ULC8 765 aa10.21□□□□□ -0.78
HMGCL-202ENST00000374487 ZGRF1Q86YA3 2104 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 F8W036 122 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 SSSCA1O60232 199 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 TNFSF13O75888 250 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 HAND1O96004 215 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 TUBG1P23258 451 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 SRSF3P84103 164 aaKnown RBP10.2□□□□□ -0.78
HMGCL-202ENST00000374487 EWSR1Q01844 656 aaKnown RBP eCLIP10.2□□□□□ -0.78
HMGCL-202ENST00000374487 ESPL1Q14674 2120 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF718Q3SXZ3 478 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 CXorf66Q5JRM2 361 aaPredicted RBP10.2□□□□□ -0.78
HMGCL-202ENST00000374487 SHEQ5VZ18 495 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 SVBPQ8N300 66 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 RPRMLQ8N4K4 120 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 IL22RA2Q969J5 263 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 STARD4Q96DR4 205 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 NKX6-2Q9C056 277 aaPredicted RBP10.2□□□□□ -0.78
HMGCL-202ENST00000374487 MAGT1Q9H0U3 335 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 CXXC4Q9H2H0 198 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 WFDC1Q9HC57 220 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 PARP11Q9NR21 331 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 TUBG2Q9NRH3 451 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 KCNIP1Q9NZI2 227 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 FZR1Q9UM11 496 aa10.2□□□□□ -0.78
HMGCL-202ENST00000374487 TRGV8A0A0C4DH27 118 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 WRBO00258 174 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 AGPAT2O15120 278 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 SEC11BP0C7V7 166 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 F2RL1P55085 397 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 NMSQ5H8A3 153 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 Q6ZRG5 221 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF826PQ6ZT77 177 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 BHLHA15Q7RTS1 189 aaPredicted RBP10.19□□□□□ -0.78
HMGCL-202ENST00000374487 RNASE11Q8TAA1 199 aaKnown RBP10.19□□□□□ -0.78
HMGCL-202ENST00000374487 UBALD1Q8TB05 177 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 SLC25A31Q9H0C2 315 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 PARP12Q9H0J9 701 aaKnown RBP10.19□□□□□ -0.78
HMGCL-202ENST00000374487 KCNS2Q9ULS6 477 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 FAM24AA6NFZ4 105 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 NPIPB11E5RHQ5 1161 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 MLNRO43193 412 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 ACAA1P09110 424 aaPredicted RBP10.19□□□□□ -0.78
HMGCL-202ENST00000374487 ATF4P18848 351 aaPredicted RBP10.19□□□□□ -0.78
HMGCL-202ENST00000374487 OMGP23515 440 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 CEACAM6P40199 344 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 CEBPDP49716 269 aaPredicted RBP10.19□□□□□ -0.78
HMGCL-202ENST00000374487 HIST2H2BCQ6DN03 193 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 ALKBH2Q6NS38 261 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 BEND4Q6ZU67 534 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 HSD17B11Q8NBQ5 300 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 ABHD14BQ96IU4 210 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 GINS3Q9BRX5 216 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 ARV1Q9H2C2 271 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 PLEKHF2Q9H8W4 249 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 UQCC1Q9NVA1 299 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 PPP1R3CQ9UQK1 317 aa10.19□□□□□ -0.78
HMGCL-202ENST00000374487 CLEC18AA5D8T8 446 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 OR5H1A6NKK0 313 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 WNT9BO14905 357 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 NXPH3O95157 252 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 PRH1P02810 166 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 OR8U9P0C7N5 309 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 PSG2P11465 335 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 ASCL1P50553 236 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF273Q14593 569 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 CLINT1Q14677 625 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 TESK1Q15569 626 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 CLEC18CQ8NCF0 446 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 OR8U1Q8NH10 309 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 MSL2Q9HCI7 577 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 MBNL3Q9NUK0 354 aaKnown RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 UFSP2Q9NUQ7 469 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 PLA2G2EQ9NZK7 142 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 FAM96BQ9Y3D0 163 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 USP9XQ93008 2570 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 IGHV2OR16-5A0A0B4J2B6 119 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 IGHV1-18A0A0C4DH31 117 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 LOC105371267A0A1B0GV96 52 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 TMEM30CPA0ZSE6 113 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 MBD3L4A6NDZ8 208 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 MBD3L3A6NE82 208 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 MBD3L5A6NJ08 208 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 TSPAN15O95858 294 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 CGAP01215 116 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 IGLV1-44P01699 117 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 SPP1P10451 314 aa10.18□□□□□ -0.78
HMGCL-202ENST00000374487 ZNF16P17020 682 aaPredicted RBP10.18□□□□□ -0.78
HMGCL-202ENST00000374487 KITLGP21583 273 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms