RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 ST3GAL6Q9Y274 331 aa12.36□□□□□ -0.43
RAPGEF1-202ENST00000372190 IGHV3-64DA0A0J9YX35 117 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 CD160O95971 181 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 CXorf1O96002 111 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 LYPD8Q6UX82 237 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 Q8WTZ3 238 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 DNASE2BQ8WZ79 361 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 DERL3Q96Q80 235 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 MGST2Q99735 147 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 GPR84Q9NQS5 396 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 GALP22466 123 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 KIR2DS2P43631 304 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF562Q6V9R5 426 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 FOXC2Q99958 501 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 TMEFF2Q9UIK5 374 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 M0R135 149 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 ATXN7O15265 892 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 F12P00748 615 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 PMELP40967 661 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF83P51522 516 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 TNFRSF9Q07011 255 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 C12orf73Q69YU5 71 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 SNRNP40Q96DI7 357 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF799Q96GE5 643 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 AMY1AP04745 511 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 INSM1Q01101 510 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF345Q14585 488 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 OR4S2Q8NH73 311 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 FLYWCH2Q96CP2 140 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 MPTX1A8MV57 137 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 ID4P47928 161 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 SPNS2Q8IVW8 549 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 OR5AC2Q9NZP5 309 aa12.35□□□□□ -0.43
RAPGEF1-202ENST00000372190 YBX1P67809 324 aaKnown RBP12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF48Q96MX3 618 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 HSD17B10Q99714 261 aaKnown RBP12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 TMEM208Q9BTX3 173 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 APOMO95445 188 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 HKR1P10072 659 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 ZNF793Q6ZN11 406 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 GBGT1Q8N5D6 347 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 ST6GALNAC3Q8NDV1 305 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 OR4P4Q8NGL7 312 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 PCGF1Q9BSM1 259 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 A0A1B0GTL3 188 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 LDLRAD4O15165 306 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 LPAR6P43657 344 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 MFAP4P55083 255 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 CEACAM16Q2WEN9 425 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 ALKBH3Q96Q83 286 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 AUP1Q9Y679 476 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 TRAV39A0A0B4J263 110 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 A8MWL6 223 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 TSPAN7P41732 249 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 SCAND1P57086 179 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 MAP1LC3AQ9H492 121 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 CTXND1A0A1B0GTU2 59 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 C7orf71A4D174 169 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 PRSS37A4D1T9 235 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 DPRXA6NFQ7 191 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 DHHO43323 396 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 FCGR2BP31994 310 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 PBOV1Q9GZY1 135 aa12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 SEBOXQ9HB31 216 aaPredicted RBP12.34□□□□□ -0.43
RAPGEF1-202ENST00000372190 ACP1P24666 158 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 RNFT1Q5M7Z0 435 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 NR2C2APQ86WQ0 139 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 NOXO1Q8NFA2 376 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 STXBP6Q8NFX7 210 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 NDUFAF3Q9BU61 184 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 HSPB7Q9UBY9 170 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 ASPDHA6ND91 283 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 PPP1CCP36873 323 aaKnown RBP12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 FZD5Q13467 585 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 MARVELD3Q96A59 401 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 SPACA5Q96QH8 159 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 CHODLQ9H9P2 273 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 H3BUT2 72 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 MEIG1Q5JSS6 88 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 POC1AQ8NBT0 407 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 HMGCLL1Q8TB92 370 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 DOK1Q99704 481 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNF257Q9Y2Q1 563 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 LINC00614P0C842 121 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 MUC1P15941 1255 aaPredicted RBP12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNF117Q03924 483 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 C19orf48Q6RUI8 117 aa12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 ZNF638Q14966 1978 aaKnown RBP12.33□□□□□ -0.44
RAPGEF1-202ENST00000372190 TRBV9A0A0B4J1U6 114 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 LOC105371267A0A1B0GV96 52 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 ANKRD20A5PA0PJZ0 165 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 SPRY3O43610 288 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 TRGC1P0CF51 173 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 PRR35P0CG20 571 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 SRD5A2P31213 254 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 AGERQ15109 404 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 PSMG4Q5JS54 123 aa12.32□□□□□ -0.44
RAPGEF1-202ENST00000372190 ATOH7Q8N100 152 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms