RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 SP6Q3SY56 376 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 MBNL2Q5VZF2 373 aaKnown RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 BHLHA15Q7RTS1 189 aaPredicted RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 CXorf67Q86X51 503 aaPredicted RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 H1FOOQ8IZA3 346 aaPredicted RBP11.88□□□□□ -0.51
LDB3-204ENST00000372066 STPG2Q8N412 459 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 OR10J5Q8NHC4 309 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 SECTM1Q8WVN6 248 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 RDH5Q92781 318 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 STARD4Q96DR4 205 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 ZNF488Q96MN9 340 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 TLNRD1Q9H1K6 362 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 HES4Q9HCC6 221 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 ZC4H2Q9NQZ6 224 aa11.88□□□□□ -0.51
LDB3-204ENST00000372066 AKAP6Q13023 2319 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 H0Y980 276 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 ST8SIA3O43173 380 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 JTBO76095 146 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 NXPH2O95156 264 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 CECR9P0C854 216 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 HOXB4P17483 251 aaPredicted RBP11.87□□□□□ -0.51
LDB3-204ENST00000372066 UCP1P25874 307 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 TIMP3P35625 211 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 P2RY1P47900 373 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 ERVS71-1P61550 626 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 FAM74A1Q5RGS3 127 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 ZNF497Q6ZNH5 498 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 LYZL2Q7Z4W2 148 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 TBC1D26Q86UD7 250 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 OR11L1Q8NGX0 322 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 SAT2Q96F10 170 aaPredicted RBP11.87□□□□□ -0.51
LDB3-204ENST00000372066 TP53RKQ96S44 253 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 GSX1Q9H4S2 264 aaPredicted RBP11.87□□□□□ -0.51
LDB3-204ENST00000372066 UBE2J1Q9Y385 318 aaPredicted RBP11.87□□□□□ -0.51
LDB3-204ENST00000372066 OR2W1Q9Y3N9 320 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 LSM5Q9Y4Y9 91 aaKnown RBP11.87□□□□□ -0.51
LDB3-204ENST00000372066 POMT1Q9Y6A1 747 aa11.87□□□□□ -0.51
LDB3-204ENST00000372066 ABCA4P78363 2273 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 IGKV1-6A0A0C4DH72 117 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 A0A1B0GWJ7 208 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 TEX46H3BTG2 121 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 SLC33A1O00400 549 aaPredicted RBP11.86□□□□□ -0.51
LDB3-204ENST00000372066 HSPB6O14558 160 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 HS3ST1O14792 307 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 GPR137BO60478 399 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 ZNF205O95201 554 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 OR2H2O95918 312 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 MBPP02686 304 aaPredicted RBP11.86□□□□□ -0.51
LDB3-204ENST00000372066 GCH1P30793 250 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 FOXF2Q12947 444 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 TMEM268Q5VZI3 342 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 ZNF695Q8IW36 515 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 SLC35G3Q8N808 338 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 ZNF610Q8N9Z0 462 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 OR4D5Q8NGN0 318 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 LILRB1Q8NHL6 650 aaPredicted RBP11.86□□□□□ -0.51
LDB3-204ENST00000372066 MBNL3Q9NUK0 354 aaKnown RBP11.86□□□□□ -0.51
LDB3-204ENST00000372066 WIPI2Q9Y4P8 454 aa11.86□□□□□ -0.51
LDB3-204ENST00000372066 TIMM8AO60220 97 aaPredicted RBP11.85□□□□□ -0.51
LDB3-204ENST00000372066 SCGB1D2O95969 90 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 LMO1P25800 156 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 MPV17P39210 176 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 ZNF818PQ6ZRF7 136 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 OR5D13Q8NGL4 314 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 LINC01560Q8TB33 94 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 ARL11Q969Q4 196 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 AKR1E2Q96JD6 320 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 TAS2R3Q9NYW6 316 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 TAAR3PQ9P1P4 343 aa11.85□□□□□ -0.51
LDB3-204ENST00000372066 IGHV2OR16-5A0A0B4J2B6 119 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 CDIPTO14735 213 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 MMP9P14780 707 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 PVALBP20472 110 aaPredicted RBP11.84□□□□□ -0.51
LDB3-204ENST00000372066 VDAC1P21796 283 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 GNMTQ14749 295 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 HMGN3Q15651 99 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 TIMM23BQ5SRD1 257 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 FOXRED2Q8IWF2 684 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 UBAC2Q8NBM4 344 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 LHFPL5Q8TAF8 219 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 MARC2Q969Z3 335 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 MBD6Q96DN6 1003 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 LINC00052Q96N35 136 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 TAF9BQ9HBM6 251 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 SLC25A15Q9Y619 301 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 BORCS7-ASMTA0A0B4J1R7 106 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 IGKV1D-13A0A0B4J2D9 117 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 IGHV1-18A0A0C4DH31 117 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
LDB3-204ENST00000372066 MLNRO43193 412 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 KCNAB3O43448 404 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 HAND1O96004 215 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 IGKV1-13P0DP09 117 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 SLC25A6P12236 298 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 FOSL1P15407 271 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 IL34Q6ZMJ4 242 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 C20orf204Q6ZNR8 217 aa11.84□□□□□ -0.51
LDB3-204ENST00000372066 SELENOHQ8IZQ5 122 aaKnown RBP11.84□□□□□ -0.51
LDB3-204ENST00000372066 OR10V1Q8NGI7 309 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms