RNA–Protein interactions for RNA: ENST00000372064.8

VEGFA-204, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,909 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-204ENST00000372064 FZR1Q9UM11 496 aa17.36■□□□□ 0.37
VEGFA-204ENST00000372064 TUBG1P23258 451 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 ZNF295-AS1Q8N0V1 137 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 ZNF610Q8N9Z0 462 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 TUBG2Q9NRH3 451 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 PLSCR4Q9NRQ2 329 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 DKK4Q9UBT3 224 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 UMAD1C9J7I0 102 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 CECR9P0C854 216 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 NFYBP25208 207 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 FIP1L1Q6UN15 594 aaKnown RBP17.35■□□□□ 0.37
VEGFA-204ENST00000372064 AIFM2Q9BRQ8 373 aa17.35■□□□□ 0.37
VEGFA-204ENST00000372064 WRBO00258 174 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 WNT9BO14905 357 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 HSPA12AO43301 675 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 FLI1Q01543 452 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-204ENST00000372064 OR2G3Q8NGZ4 309 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 OPN3Q9H1Y3 402 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-204ENST00000372064 PTPRBP23467 1997 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 A0A1B0GW64 132 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 CST7O76096 145 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 PPT1P50897 306 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 KIAA2026Q5HYC2 2103 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 LFNGQ8NES3 379 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 FAM213BQ8TBF2 198 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP17.34■□□□□ 0.37
VEGFA-204ENST00000372064 PSPNO60542 156 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 CEACAM4O75871 244 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 TNFSF13O75888 250 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 Q6ZRM9 215 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 CXXC4Q9H2H0 198 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 LIN7CQ9NUP9 197 aaKnown RBP17.34■□□□□ 0.37
VEGFA-204ENST00000372064 PPP1R3CQ9UQK1 317 aa17.34■□□□□ 0.37
VEGFA-204ENST00000372064 DSPP15924 2871 aaKnown RBP17.33■□□□□ 0.37
VEGFA-204ENST00000372064 ZNF891A8MT65 544 aaPredicted RBP17.33■□□□□ 0.37
VEGFA-204ENST00000372064 H7C2Y5 167 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 IGLV1-44P01699 117 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 CEACAM1P13688 526 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 KITLGP21583 273 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 EPHA1P21709 976 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 CEACAM6P40199 344 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 ZNF585BQ52M93 769 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 RAB40CQ96S21 281 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 RFNGQ9Y644 331 aa17.33■□□□□ 0.37
VEGFA-204ENST00000372064 AHRRA9YTQ3 701 aa17.33■□□□□ 0.36
VEGFA-204ENST00000372064 CD200P41217 278 aa17.33■□□□□ 0.36
VEGFA-204ENST00000372064 FABP6P51161 128 aa17.33■□□□□ 0.36
VEGFA-204ENST00000372064 IZUMO4Q1ZYL8 232 aa17.33■□□□□ 0.36
VEGFA-204ENST00000372064 GNPNAT1Q96EK6 184 aaPredicted RBP17.33■□□□□ 0.36
VEGFA-204ENST00000372064 ATP5SQ99766 215 aa17.33■□□□□ 0.36
VEGFA-204ENST00000372064 RBM7Q9Y580 266 aaKnown RBP17.33■□□□□ 0.36
VEGFA-204ENST00000372064 TXNL1O43396 289 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 PRAMEF6Q5VXH4 476 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 Q6ZR03 302 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 STARD4Q96DR4 205 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 EIF5A2Q9GZV4 153 aaKnown RBP17.32■□□□□ 0.36
VEGFA-204ENST00000372064 RIF1Q5UIP0 2472 aaKnown RBP17.32■□□□□ 0.36
VEGFA-204ENST00000372064 TMEM30CPA0ZSE6 113 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 TIMM8AO60220 97 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-204ENST00000372064 IGKV1-5P01602 117 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 PPP1CCP36873 323 aaKnown RBP17.32■□□□□ 0.36
VEGFA-204ENST00000372064 DRAM1Q8N682 238 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 TMEM217Q8N7C4 229 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 KDF1Q8NAX2 398 aaPredicted RBP17.32■□□□□ 0.36
VEGFA-204ENST00000372064 PBDC1Q9BVG4 233 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 MSL2Q9HCI7 577 aa17.32■□□□□ 0.36
VEGFA-204ENST00000372064 MED19A0JLT2 244 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-204ENST00000372064 A6NLC8 198 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 SLC35E4Q6ICL7 350 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 SEM1Q6ZVN7 128 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 ZADH2Q8N4Q0 377 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 PRR7Q8TB68 274 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 ZNF71Q9NQZ8 489 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-204ENST00000372064 KCNS2Q9ULS6 477 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 PROCRQ9UNN8 238 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 WSB1Q9Y6I7 421 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 CGAP01215 116 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 TFF1P04155 84 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 RPL23AP62750 156 aaKnown RBP17.31■□□□□ 0.36
VEGFA-204ENST00000372064 SP5Q6BEB4 398 aaPredicted RBP17.31■□□□□ 0.36
VEGFA-204ENST00000372064 BCL2L14Q9BZR8 327 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 UFSP2Q9NUQ7 469 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 CACNG5Q9UF02 275 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 A0A1B0GWJ7 208 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 SULT1A1P50225 295 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 ACP7Q6ZNF0 438 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 OR10Z1Q8NGY1 313 aa17.31■□□□□ 0.36
VEGFA-204ENST00000372064 SNIP1Q8TAD8 396 aaKnown RBP17.31■□□□□ 0.36
VEGFA-204ENST00000372064 IGHV1-18A0A0C4DH31 117 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 MBNL2Q5VZF2 373 aaKnown RBP17.3■□□□□ 0.36
VEGFA-204ENST00000372064 WDR82Q6UXN9 313 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 STX12Q86Y82 276 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 TOLLIPQ9H0E2 274 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 KCNIP1Q9NZI2 227 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 PAX6P26367 422 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 RNASE11Q8TAA1 199 aaKnown RBP17.3■□□□□ 0.36
VEGFA-204ENST00000372064 ABHD14AQ9BUJ0 271 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 HIPK2Q9H2X6 1198 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 SMDT1Q9H4I9 107 aa17.3■□□□□ 0.36
VEGFA-204ENST00000372064 BOD1L1Q8NFC6 3051 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms