RNA–Protein interactions for RNA: ENST00000371937.8

ATPAF1-202, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-202ENST00000371937 HRNRQ86YZ3 2850 aaPredicted RBP21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 TRGV10A0A0A0MS01 117 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 ADAM20O43506 726 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 SIX6O95475 246 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 OR2T35Q8NGX2 323 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 SPOCK3Q9BQ16 436 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 TMEM246Q9BRR3 403 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 OR2S2Q9NQN1 319 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 CCL28Q9NRJ3 127 aa21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 RBM7Q9Y580 266 aaKnown RBP21.84■■□□□ 1.09
ATPAF1-202ENST00000371937 MPPED1O15442 326 aa21.83■■□□□ 1.09
ATPAF1-202ENST00000371937 RNF224P0DH78 156 aa21.83■■□□□ 1.09
ATPAF1-202ENST00000371937 GZMKP49863 264 aa21.83■■□□□ 1.09
ATPAF1-202ENST00000371937 NKX2-5P52952 324 aaPredicted RBP21.83■■□□□ 1.09
ATPAF1-202ENST00000371937 ANKRD55Q3KP44 614 aa21.83■■□□□ 1.09
ATPAF1-202ENST00000371937 RFESDQ8TAC1 157 aa21.83■■□□□ 1.09
ATPAF1-202ENST00000371937 LYNX1G3V0Z9 82 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 SMLR1H3BR10 107 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 NDUFB3O43676 98 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 LYNX1P0DP58 116 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 NDUFB7P17568 137 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 LRRC10Q5BKY1 277 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 OR52L2PQ8NGH6 319 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 HYLS1Q96M11 299 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 SUCNR1Q9BXA5 334 aa21.83■■□□□ 1.08
ATPAF1-202ENST00000371937 HSD17B6O14756 317 aa21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 RP2O75695 350 aa21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 LY6G6FQ5SQ64 297 aa21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 DCAF12L2Q5VW00 463 aa21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 LDLRAD3Q86YD5 345 aa21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 BVESQ8NE79 360 aa21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 RAB18Q9NP72 206 aa21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 USP9XQ93008 2570 aaPredicted RBP21.82■■□□□ 1.08
ATPAF1-202ENST00000371937 LRBAP50851 2863 aa21.81■■□□□ 1.08
ATPAF1-202ENST00000371937 CGB3P0DN86 165 aa21.81■■□□□ 1.08
ATPAF1-202ENST00000371937 CGB7P0DN87 165 aa21.81■■□□□ 1.08
ATPAF1-202ENST00000371937 CORO2AQ92828 525 aa21.81■■□□□ 1.08
ATPAF1-202ENST00000371937 AKR1E2Q96JD6 320 aa21.81■■□□□ 1.08
ATPAF1-202ENST00000371937 CALYQ9NYX4 217 aa21.81■■□□□ 1.08
ATPAF1-202ENST00000371937 hADV38S2A0JD32 116 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 MEX3AA1L020 520 aaKnown RBP21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 OR8U9P0C7N5 309 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 MEF2CQ06413 473 aaPredicted RBP21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 OR8U1Q8NH10 309 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 JPT1Q9UK76 154 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 KBTBD11-OT1A0A1B0GTJ5 212 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 F2RL2O00254 374 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 RGS11O94810 467 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 OR5AC1P0C628 307 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 DAOP14920 347 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 LYPD2Q6UXB3 125 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 TBC1D26Q86UD7 250 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 PDCD10Q9BUL8 212 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 CLN8Q9UBY8 286 aa21.8■■□□□ 1.08
ATPAF1-202ENST00000371937 C3orf85A0A1B0GTC6 90 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 DNASE1P24855 282 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 PPP1CCP36873 323 aaKnown RBP21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 SRSF4Q08170 494 aaKnown RBP21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 TMEM187Q14656 261 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 GNMTQ14749 295 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 FAM216AQ8WUB2 273 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 PARP12Q9H0J9 701 aaKnown RBP21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 PRR13Q9NZ81 148 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 LPAR3Q9UBY5 353 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 LINC00312Q9Y6C7 94 aa21.79■■□□□ 1.08
ATPAF1-202ENST00000371937 ZNF729A6NN14 1252 aaPredicted RBP21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 CCSO14618 274 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 IGHV2-70P01814 119 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 EDARADDQ8WWZ3 215 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 TIMD4Q96H15 378 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 GNG12Q9UBI6 72 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 UBE2J1Q9Y385 318 aaPredicted RBP21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 FAM25EA8MYX2 175 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 PHF1O43189 567 aaPredicted RBP21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 SP6Q3SY56 376 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 GSG1LQ6UXU4 331 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 RAB1CQ92928 201 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 METTL8Q9H825 291 aaKnown RBP21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 LINC00574Q9H8X3 128 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 KCNS2Q9ULS6 477 aa21.78■■□□□ 1.08
ATPAF1-202ENST00000371937 UBR5O95071 2799 aaPredicted RBP21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 DVL1O14640 695 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 PGLYRP1O75594 196 aaPredicted RBP21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 RPL31P62899 125 aaKnown RBP21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 SRPXP78539 464 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 TLE4Q04727 773 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 C17orf58Q2M2W7 97 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 TMEM30BQ3MIR4 351 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 LIAT1Q6ZQX7 453 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 LRTM2Q8N967 370 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 DRAXINQ8NBI3 349 aaPredicted RBP21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 GLYATL2Q8WU03 294 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 TAS2R3Q9NYW6 316 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 CTSZQ9UBR2 303 aa21.77■■□□□ 1.08
ATPAF1-202ENST00000371937 IGHV3-43A0A0B4J1X8 118 aa21.76■■□□□ 1.07
ATPAF1-202ENST00000371937 C5orf51A6NDU8 294 aa21.76■■□□□ 1.07
ATPAF1-202ENST00000371937 YPEL1O60688 119 aa21.76■■□□□ 1.07
ATPAF1-202ENST00000371937 B3GALNT1O75752 331 aa21.76■■□□□ 1.07
ATPAF1-202ENST00000371937 IGHV3-43DP0DP04 118 aa21.76■■□□□ 1.07
ATPAF1-202ENST00000371937 FGFRL1Q8N441 504 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms