RNA–Protein interactions for RNA: ENST00000368623.7

SLC39A1-204, Transcript of solute carrier family 39 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC39A1, Length 2,723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A1-204ENST00000368623 PCSK4Q6UW60 755 aa12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 RP1L1Q8IWN7 2480 aaPredicted RBP12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 KMT2EQ8IZD2 1858 aa12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 TMEM252Q8N6L7 170 aa12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 TNRC6AQ8NDV7 1962 aaKnown RBP12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 MRPL30Q8TCC3 161 aaKnown RBP12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 MALSU1Q96EH3 234 aa12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 PLSCR2Q9NRY7 297 aa12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 ATP23Q9Y6H3 246 aa12.89□□□□□ -0.35
SLC39A1-204ENST00000368623 ZFP92A6NM28 416 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 CDS2O95674 445 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 MT-CO3P00414 261 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 SRP19P09132 144 aaKnown RBP12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 PGA5P0DJD9 388 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 NKX6-1P78426 367 aaPredicted RBP12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 CLN3Q13286 438 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 RNFT1Q5M7Z0 435 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 OR5P3Q8WZ94 311 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 TMEM56Q96MV1 263 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 DDA1Q9BW61 102 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 C11orf1Q9H5F2 150 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 GFOD1Q9NXC2 390 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 GNG13Q9P2W3 67 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 WSB1Q9Y6I7 421 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 TMEM56-RWDD3S4R434 201 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 USF3Q68DE3 2245 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 SNRPCP09234 159 aaKnown RBP12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 DYNLT3P51808 116 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 RAB11AP62491 216 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 ICAM4Q14773 271 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 MPV17LQ2QL34 196 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 MDP1Q86V88 176 aa12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 ERRFI1Q9UJM3 462 aaPredicted RBP12.88□□□□□ -0.35
SLC39A1-204ENST00000368623 ANKRD30BLA7E2S9 258 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 CHST1O43916 411 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 PGLYRP1O75594 196 aaPredicted RBP12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 TUSC2O75896 110 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 VAMP2P63027 116 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 PMP22Q01453 160 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 NMSQ5H8A3 153 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 TMEM164Q5U3C3 297 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 CYB5R2Q6BCY4 276 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 DBX2Q6ZNG2 339 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 NECAP1Q8NC96 275 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 CA5BP1Q8WTZ4 195 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 ZPBPQ9BS86 351 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 SIRPB1O00241 398 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 PHOX2AO14813 284 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 SS18L1O75177 396 aaPredicted RBP12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 APLNRP35414 380 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 RPL23AP62750 156 aaKnown RBP12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 ALKBH6Q3KRA9 238 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 WDR25Q64LD2 544 aaPredicted RBP12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 GCNT2Q8N0V5 402 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 HIST3H2BBQ8N257 126 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 OR5A2Q8NGI9 324 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 ABI3Q9P2A4 366 aa12.87□□□□□ -0.35
SLC39A1-204ENST00000368623 DOCK11Q5JSL3 2073 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 IFNL4K9M1U5 179 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 WISP2O76076 250 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 SP1P08047 785 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 CD55P08174 381 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 PSG2P11465 335 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 CD59P13987 128 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM58AQ8N1B3 248 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 PLPPR1Q8TBJ4 325 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 TAAR3PQ9P1P4 343 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 A0A087X0M5 115 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 KIR2DS1A0A191URI9 304 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 A0A1B0GX30 115 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 SCAF4O95104 1147 aaKnown RBP12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 TNFSF15O95150 251 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 LMO1P25800 156 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 KIR2DS4P43632 304 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 KIR2DS1Q14954 304 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 LCN15Q6UWW0 184 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 CMTM1Q8IZ96 169 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 COMMD1Q8N668 190 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 IL22RA1Q8N6P7 574 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 LYRM2Q9NU23 88 aaPredicted RBP12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 DLL3Q9NYJ7 618 aa12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 STRAPQ9Y3F4 350 aaKnown RBP12.86□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A10PA6NDY2 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A18PA6NE21 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A16PA6NEW6 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A20PA6NIJ5 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A8PA6NJQ4 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A7PA6NKC0 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A22PA8MWA6 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A12PA8MX19 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A5PA8MXJ8 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A23PA8MXZ1 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A15PP0C7V4 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A13PP0C7W8 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A14PP0C7W9 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 FAM90A24PP0C7X0 464 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 ZNF16P17020 682 aaPredicted RBP12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 VDAC1P21796 283 aa12.85□□□□□ -0.35
SLC39A1-204ENST00000368623 UCP1P25874 307 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms