RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 ELP2Q6IA86 826 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 OR10V1Q8NGI7 309 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 OR13C9Q8NGT0 318 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 OR10AC1Q8NH08 325 aa10.95□□□□□ -0.66
VAMP4-202ENST00000367740 UTP4Q969X6 686 aaKnown RBP10.95□□□□□ -0.66
VAMP4-202ENST00000367740 DPCDQ9BVM2 203 aaPredicted RBP10.95□□□□□ -0.66
VAMP4-202ENST00000367740 LOC102724200A0A096LPH7 203 aaPredicted RBP10.94□□□□□ -0.66
VAMP4-202ENST00000367740 TMEM30CPA0ZSE6 113 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 PRSS29PA6NIE9 313 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 ORC5O43913 435 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 OCM2P0CE71 109 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 OCMP0CE72 109 aaPredicted RBP10.94□□□□□ -0.66
VAMP4-202ENST00000367740 TMEM225BP0DP42 221 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 DBTP11182 482 aaKnown RBP10.94□□□□□ -0.66
VAMP4-202ENST00000367740 ZNF20P17024 532 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 BMI1P35226 326 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 DEFA5Q01523 94 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 ZNF45Q02386 682 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 PIGYQ3MUY2 71 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 BCDIN3DQ7Z5W3 292 aaKnown RBP10.94□□□□□ -0.66
VAMP4-202ENST00000367740 TCEANCQ8N8B7 351 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 SUMF2Q8NBJ7 301 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 GIPC3Q8TF64 312 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 CCDC107Q8WV48 283 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 ZC4H2Q9NQZ6 224 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 TP53TG1Q9Y2A0 90 aa10.94□□□□□ -0.66
VAMP4-202ENST00000367740 RRHO14718 337 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 OSMP13725 252 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 GUCA2BQ16661 112 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 ZSCAN26Q16670 478 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 TATDN3Q17R31 274 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 ZNF575Q86XF7 245 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 ODF3L1Q8IXM7 274 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 POC5Q8NA72 575 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 TBX5Q99593 518 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 TVP23BQ9NYZ1 205 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 GNG12Q9UBI6 72 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 PEMTQ9UBM1 199 aa10.93□□□□□ -0.66
VAMP4-202ENST00000367740 A0A0G2JLM5 398 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 MAGEB3O15480 346 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 SPRY2O43597 315 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 MITFO75030 526 aaPredicted RBP10.92□□□□□ -0.66
VAMP4-202ENST00000367740 ATP6V1B2P21281 511 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 RPEL1Q2QD12 228 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 DEFB135Q30KP9 77 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 CYP2R1Q6VVX0 501 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 WDR89Q96FK6 387 aaPredicted RBP10.92□□□□□ -0.66
VAMP4-202ENST00000367740 ZNF355PQ9NSJ1 428 aa10.92□□□□□ -0.66
VAMP4-202ENST00000367740 PEF1Q9UBV8 284 aaKnown RBP10.92□□□□□ -0.66
VAMP4-202ENST00000367740 METTL15A6NJ78 407 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 H3BUA1 57 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 RTL8CO15255 209 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 XRCC3O43542 346 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 AIREO43918 545 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 PRKYO43930 277 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 PLGLAQ15195 96 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 KISS1Q15726 138 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 DEFB114Q30KQ6 69 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 STEAP3Q658P3 488 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 ZNF343Q6P1L6 599 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 TMEM217Q8N7C4 229 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 DYNLRB2Q8TF09 96 aa10.91□□□□□ -0.66
VAMP4-202ENST00000367740 TCRBV5S2A0A599 114 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 EDN2P20800 178 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 Q6ZWC4 215 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 SLC16A13Q7RTY0 426 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 GVQW1Q8N7I0 195 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 OR51A4Q8NGJ6 313 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 OR10K1Q8NGX5 313 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 RNF183Q96D59 192 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 TEX12Q9BXU0 123 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 MAGIXQ9H6Y5 334 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 IFT22Q9H7X7 185 aa10.9□□□□□ -0.66
VAMP4-202ENST00000367740 A0A1W2PQL4 384 aaPredicted RBP10.89□□□□□ -0.67
VAMP4-202ENST00000367740 HMGB1P1B2RPK0 211 aaPredicted RBP10.89□□□□□ -0.67
VAMP4-202ENST00000367740 M0R129 80 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 SULT1C4O75897 302 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 CA2P00918 260 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 KIR2DS2P43631 304 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 ALKBH1Q13686 389 aaKnown RBP10.89□□□□□ -0.67
VAMP4-202ENST00000367740 GK3PQ14409 553 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 TMEM30BQ3MIR4 351 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 ZNF691Q5VV52 312 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 TMEM244Q5VVB8 128 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 FAM131AQ6UXB0 335 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 ZNF562Q6V9R5 426 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 ZNF833PQ6ZTB9 187 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 PRR18Q8N4B5 295 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 BVESQ8NE79 360 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 PXT1Q8NFP0 134 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 OR1L1Q8NH94 360 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 CMTM5Q96DZ9 223 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 CLCC1Q96S66 551 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 ABHD14AQ9BUJ0 271 aa10.89□□□□□ -0.67
VAMP4-202ENST00000367740 PARP12Q9H0J9 701 aaKnown RBP10.89□□□□□ -0.67
VAMP4-202ENST00000367740 APOBP04114 4563 aaKnown RBP10.88□□□□□ -0.67
VAMP4-202ENST00000367740 LRP1BQ9NZR2 4599 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 AIPO00170 330 aa10.88□□□□□ -0.67
VAMP4-202ENST00000367740 SPINT2O43291 252 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms