RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 FAM90A10PA6NDY2 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A18PA6NE21 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A16PA6NEW6 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A20PA6NIJ5 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A8PA6NJQ4 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A7PA6NKC0 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A22PA8MWA6 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A12PA8MX19 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A5PA8MXJ8 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A23PA8MXZ1 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 PPP5D1E7EU14 171 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A15PP0C7V4 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A13PP0C7W8 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A14PP0C7W9 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM90A24PP0C7X0 464 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 BSPH1Q075Z2 132 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 KLF14Q8TD94 323 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-204ENST00000367248 SLC45A2Q9UMX9 530 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 TTC28Q96AY4 2481 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 ISG15P05161 165 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 MPV17P39210 176 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 SUCLG1P53597 346 aaKnown RBP9.99□□□□□ -0.81
SYNE1-204ENST00000367248 TBR1Q16650 682 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 ATP6V1FQ16864 119 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 C17orf82Q86X59 251 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-204ENST00000367248 LILRB1Q8NHL6 650 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-204ENST00000367248 BCL2L2Q92843 193 aaPredicted RBP9.99□□□□□ -0.81
SYNE1-204ENST00000367248 PGLYRP3Q96LB9 341 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 FAM206AQ9NX38 181 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 TUBGCP6Q96RT7 1819 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 DHRS7CA6NNS2 312 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 KLF4O43474 513 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 CPN1P15169 458 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 SLC25A53Q5H9E4 307 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 ZDHHC8Q9ULC8 765 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 PLXNA1Q9UIW2 1896 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 THY1P04216 161 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 PAFAH1B2P68402 229 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 IL24Q13007 206 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 MRPL24Q96A35 216 aaKnown RBP9.99□□□□□ -0.81
SYNE1-204ENST00000367248 PRNDQ9UKY0 176 aa9.99□□□□□ -0.81
SYNE1-204ENST00000367248 XKRY2A2RUG3 117 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 SYNGR1O43759 233 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 FCGR3AP08637 254 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 CD200P41217 278 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 KLF9Q13886 244 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-204ENST00000367248 IFNL4K9M1U5 179 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 CDS2O95674 445 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 IGHMP01871 453 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 FAM106CPP0CH98 169 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 TCEAL7Q9BRU2 100 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 OR51I2Q9H344 312 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 PLA2G10O15496 165 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 ALX3O95076 343 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 OR8I2Q8N0Y5 310 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 FBLIM1Q8WUP2 373 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 ELOVL5Q9NYP7 299 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 FBXL17Q9UF56 701 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 C20orf202A1L168 122 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 NDUFA2O43678 99 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 ZIC3O60481 467 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 H3F3AP84243 136 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 VSIG4Q9Y279 399 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 MAP1LC3B2A6NCE7 125 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 KLF7O75840 302 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-204ENST00000367248 KIAA0141Q14154 515 aaPredicted RBP9.98□□□□□ -0.81
SYNE1-204ENST00000367248 COMMD1Q8N668 190 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 FAM57AQ8TBR7 257 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 ZNF596Q8TC21 504 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 MAP1LC3BQ9GZQ8 125 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 TRBV5-7A0A0A0MS05 114 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 TMEM54Q969K7 222 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 CXorf58Q96LI9 332 aa9.98□□□□□ -0.81
SYNE1-204ENST00000367248 OR2H2O95918 312 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 G6PCP35575 357 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 ZNF79Q15937 498 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 FFAR4Q5NUL3 377 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 FAM201AQ5SY85 155 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 SLC25A42Q86VD7 318 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 SYNGR3O43761 229 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 FAM3AP98173 230 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 C4orf17Q53FE4 359 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 CD200R1LQ6Q8B3 271 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 GCSAMQ8N6F7 178 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 C14orf79Q96F83 325 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 SNX22Q96L94 193 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 NEURL2Q9BR09 285 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 MESP1Q9BRJ9 268 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 CHRDL1Q9BU40 450 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 ZNF716A6NP11 495 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 INHBBP09529 407 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 CRYBA2P53672 197 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 CLEC9AQ6UXN8 241 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 G6PC2Q9NQR9 355 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 ZNF236Q9UL36 1845 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 IGHV3-35A0A0C4DH35 117 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 SPINK4O60575 86 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 VSIG10L2P0DP72 767 aa9.97□□□□□ -0.81
SYNE1-204ENST00000367248 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
SYNE1-204ENST00000367248 GPR137Q96N19 417 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms