RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 LRRC29Q8WV35 223 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 PHYHIPQ92561 330 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 THRSPQ92748 146 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 BORCS8Q96FH0 119 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 ZNF488Q96MN9 340 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 MS4A10Q96PG2 267 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 OR8B2Q96RD0 313 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 C19orf24Q9BVV8 132 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 C1QTNF4Q9BXJ3 329 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 PKIBQ9C010 78 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 WDR13Q9H1Z4 485 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 RNF167Q9H6Y7 350 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 HES4Q9HCC6 221 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 TMEM138Q9NPI0 162 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 TXNL4BQ9NX01 149 aaKnown RBP6.33□□□□□ -1.4
YBX3-204ENST00000366290 MTCH1Q9NZJ7 389 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 OR5V1Q9UGF6 321 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 STUB1Q9UNE7 303 aa6.33□□□□□ -1.4
YBX3-204ENST00000366290 MEGF8Q7Z7M0 2845 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 IGHV3OR15-7A0A075B7D8 119 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 C15orf62A8K5M9 175 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 SPRY1O43609 319 aaPredicted RBP6.32□□□□□ -1.4
YBX3-204ENST00000366290 ANGPTL7O43827 346 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 FCN3O75636 299 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 MAS1P04201 325 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 HCKP08631 526 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 SRMP19623 302 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 CALRP27797 417 aaKnown RBP6.32□□□□□ -1.4
YBX3-204ENST00000366290 FGF9P31371 208 aaPredicted RBP6.32□□□□□ -1.4
YBX3-204ENST00000366290 OR3A4PP47883 348 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 NPBWR2P48146 333 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 PITPNBP48739 271 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 ATP1B3P54709 279 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 HILS1P60008 231 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 GNB2P62879 340 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 PPP3R1P63098 170 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 IL24Q13007 206 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 PLA2G7Q13093 441 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 PDZK1IP1Q13113 114 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 IZUMO4Q1ZYL8 232 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 ZNF585BQ52M93 769 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 DDI2Q5TDH0 399 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 WDR25Q64LD2 544 aaPredicted RBP6.32□□□□□ -1.4
YBX3-204ENST00000366290 C22orf42Q6IC83 251 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 LYPD2Q6UXB3 125 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 ASCL4Q6XD76 172 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 C9orf139Q6ZV77 190 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 SLC25A26Q70HW3 274 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 NR2C2APQ86WQ0 139 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 BATF2Q8N1L9 274 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 POC1AQ8NBT0 407 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 OR4D6Q8NGJ1 314 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 OR5D18Q8NGL1 313 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 UPRTQ96BW1 309 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 C1orf147Q96MC9 270 aaPredicted RBP6.32□□□□□ -1.4
YBX3-204ENST00000366290 DUX5Q96PT3 197 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 NRIP2Q9BQI9 281 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 NAA50Q9GZZ1 169 aaKnown RBP6.32□□□□□ -1.4
YBX3-204ENST00000366290 DNTTIP1Q9H147 329 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 VCX3AQ9NNX9 186 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 CTSZQ9UBR2 303 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 CLN8Q9UBY8 286 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 AUP1Q9Y679 476 aa6.32□□□□□ -1.4
YBX3-204ENST00000366290 TRAV1-2A0A0B4J238 106 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 A0A0B4J293 547 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 A0A1B0GW55 424 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DVL1O14640 695 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 XRCC3O43542 346 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 VENTXO95231 258 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 ECDO95905 644 aaPredicted RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 TFF1P04155 84 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 LIPFP07098 398 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 SFTPBP07988 381 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4L2P0CJ85 424 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4L3P0CJ86 424 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4L4P0CJ87 422 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4L5P0CJ88 424 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4L6P0CJ89 424 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4L7P0CJ90 424 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 BCL3P20749 454 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 MC5RP33032 325 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 ZNF93P35789 620 aaPredicted RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 TGFBR1P36897 503 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 POU3F4P49335 361 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 OR10A3P58181 314 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 BPIFB3P59826 476 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 GMFBP60983 142 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 MICBQ29980 383 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 KLF17Q5JT82 389 aaPredicted RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 C1orf100Q5SVJ3 147 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 STUMQ69YW2 141 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 DUX4L9Q6RFH8 374 aaPredicted RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 BTNL3Q6UXE8 466 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 ACP7Q6ZNF0 438 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 RBPMS2Q6ZRY4 209 aaKnown RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 CDH26Q8IXH8 852 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 NKAIN3Q8N8D7 197 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 ZSCAN4Q8NAM6 433 aaPredicted RBP6.31□□□□□ -1.4
YBX3-204ENST00000366290 Q8NFD4 153 aa6.31□□□□□ -1.4
YBX3-204ENST00000366290 PXT1Q8NFP0 134 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms