RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 CUL9Q8IWT3 2517 aa11.91□□□□□ -0.5
CTR9-201ENST00000361367 APOBEC3AP31941 199 aaPredicted RBP11.9□□□□□ -0.5
CTR9-201ENST00000361367 ERVS71-1P61550 626 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 SSX2Q16385 188 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 RASL11BQ9BPW5 248 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 CLPSP04118 112 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 CD200P41217 278 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 LYZL2Q7Z4W2 148 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 GCSAMQ8N6F7 178 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 MITD1Q8WV92 249 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 OR5P3Q8WZ94 311 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 Q96M66 194 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 DHRS9Q9BPW9 319 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 ABCA4P78363 2273 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 SS18L1O75177 396 aaPredicted RBP11.9□□□□□ -0.5
CTR9-201ENST00000361367 MMDQ15546 238 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 RPUSD4Q96CM3 377 aaKnown RBP11.9□□□□□ -0.5
CTR9-201ENST00000361367 TMEM231Q9H6L2 316 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 HSF4Q9ULV5 492 aa11.9□□□□□ -0.5
CTR9-201ENST00000361367 IGHV2OR16-5A0A0B4J2B6 119 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 LY6G6EA0A0G2JKS1 128 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 IGHV1-69-2A0A0G2JMI3 117 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 ZNF727A8MUV8 499 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 TIGITQ495A1 244 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 PLA2G2CQ5R387 149 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 U3KQA8 63 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 CHST1O43916 411 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 RCC1P18754 421 aaPredicted RBP11.89□□□□□ -0.51
CTR9-201ENST00000361367 BSPH1Q075Z2 132 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 RXFP4Q8TDU9 374 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 FBXL17Q9UF56 701 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 ZNF835Q9Y2P0 537 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 A1L4Q6 167 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 CDS2O95674 445 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 PSG2P11465 335 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 DAOP14920 347 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 CXCL3P19876 107 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 G6PCP35575 357 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 DTD1Q8TEA8 209 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 OR1A1Q9P1Q5 309 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 VSIG4Q9Y279 399 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 RGP1Q92546 391 aaPredicted RBP11.89□□□□□ -0.51
CTR9-201ENST00000361367 ABHD14BQ96IU4 210 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 C20orf24Q9BUV8 137 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 TMUB1Q9BVT8 246 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 C1QTNF5Q9BXJ0 243 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 PRNDQ9UKY0 176 aa11.89□□□□□ -0.51
CTR9-201ENST00000361367 TMEM14DPA8MWL7 114 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 LGALS7P47929 136 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 IL24Q13007 206 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 SNRNP40Q96DI7 357 aaKnown RBP11.88□□□□□ -0.51
CTR9-201ENST00000361367 NKX2-6A6NCS4 301 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 UBE2G2P60604 165 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 IFITM3Q01628 133 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 FFAR4Q5NUL3 377 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 ZFP82Q8N141 532 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 OR1L1Q8NH94 360 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 BTF3L4Q96K17 158 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 SAV1Q9H4B6 383 aaPredicted RBP11.88□□□□□ -0.51
CTR9-201ENST00000361367 C19orf12Q9NSK7 152 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 RNF24Q9Y225 148 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 TIMM9Q9Y5J7 89 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 CELA3BP08861 270 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 INHBBP09529 407 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 ZNF154Q13106 437 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 KLHDC3Q9BQ90 382 aa11.88□□□□□ -0.51
CTR9-201ENST00000361367 REPIN1Q9BWE0 567 aaKnown RBP11.88□□□□□ -0.51
CTR9-201ENST00000361367 PTGDSP41222 190 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 TMEM33P57088 247 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 PSG7Q13046 419 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 HABP2Q14520 560 aaPredicted RBP11.87□□□□□ -0.51
CTR9-201ENST00000361367 MEGF10Q96KG7 1140 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 TMEM147Q9BVK8 224 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 CALYQ9NYX4 217 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 FREM3P0C091 2139 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 TMEM255AQ5JRV8 349 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 GGNQ86UU5 652 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 AQP3Q92482 292 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 NDFIP1Q9BT67 221 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 ALX4Q9H161 411 aaPredicted RBP11.87□□□□□ -0.51
CTR9-201ENST00000361367 OPN4Q9UHM6 478 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 E9PLN8 166 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 SSTP61278 116 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 FAM209AQ5JX71 171 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 PEAR1Q5VY43 1037 aaPredicted RBP11.87□□□□□ -0.51
CTR9-201ENST00000361367 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 KDF1Q8NAX2 398 aaPredicted RBP11.87□□□□□ -0.51
CTR9-201ENST00000361367 VKORC1Q9BQB6 163 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 MSRB2Q9Y3D2 182 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 U3KQ87 197 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 ZNF407Q9C0G0 2248 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 ZNF785A8K8V0 405 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 ATP6V1FQ16864 119 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 RNASE6Q93091 150 aaKnown RBP11.87□□□□□ -0.51
CTR9-201ENST00000361367 V9GYS6 101 aa11.87□□□□□ -0.51
CTR9-201ENST00000361367 SHISA3A0PJX4 238 aa11.86□□□□□ -0.51
CTR9-201ENST00000361367 H7BYZ3 331 aa11.86□□□□□ -0.51
CTR9-201ENST00000361367 TMEM65Q6PI78 240 aa11.86□□□□□ -0.51
CTR9-201ENST00000361367 SMIM7Q9BQ49 75 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms