RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 MBD3L2Q8NHZ7 208 aaPredicted RBP19.11■□□□□ 0.65
LDB1-201ENST00000361198 C2CD4CQ8TF44 421 aa19.11■□□□□ 0.65
LDB1-201ENST00000361198 FAM24AA6NFZ4 105 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 K7EM74 188 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 KLK10O43240 276 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 ZNF146Q15072 292 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 KIAA2026Q5HYC2 2103 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 OR10J5Q8NHC4 309 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 SFT2D1Q8WV19 159 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 PBDC1Q9BVG4 233 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 FZR1Q9UM11 496 aa19.1■□□□□ 0.65
LDB1-201ENST00000361198 IGSF23A1L1A6 192 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 PITX3O75364 302 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 IGLV1-44P01699 117 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 RAB5BP61020 215 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 POLR2GP62487 172 aaKnown RBP eCLIP19.09■□□□□ 0.65
LDB1-201ENST00000361198 ZNF324BQ6AW86 544 aaPredicted RBP19.09■□□□□ 0.65
LDB1-201ENST00000361198 ZFP82Q8N141 532 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 SNIP1Q8TAD8 396 aaKnown RBP19.09■□□□□ 0.65
LDB1-201ENST00000361198 IL1F10Q8WWZ1 152 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 SMDT1Q9H4I9 107 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 PLEKHF2Q9H8W4 249 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 LYRM2Q9NU23 88 aaPredicted RBP19.09■□□□□ 0.65
LDB1-201ENST00000361198 RP1L1Q8IWN7 2480 aaPredicted RBP19.09■□□□□ 0.65
LDB1-201ENST00000361198 PCP4L1A6NKN8 68 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 TMEM210A6NLX4 147 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 MT-ND4LP03901 98 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 PTAFRP25105 342 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 UCP1P25874 307 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 AKR1C3P42330 323 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 NMSQ5H8A3 153 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 ZNF497Q6ZNH5 498 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 LILRB1Q8NHL6 650 aaPredicted RBP19.09■□□□□ 0.65
LDB1-201ENST00000361198 C12orf57Q99622 126 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 CABLES2Q9BTV7 478 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 SLC35B3Q9H1N7 401 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 TREM2Q9NZC2 230 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 OR2W1Q9Y3N9 320 aa19.09■□□□□ 0.65
LDB1-201ENST00000361198 IGHV1-18A0A0C4DH31 117 aa19.08■□□□□ 0.65
LDB1-201ENST00000361198 TNFSF12O43508 249 aa19.08■□□□□ 0.65
LDB1-201ENST00000361198 MDH2P40926 338 aaKnown RBP19.08■□□□□ 0.65
LDB1-201ENST00000361198 FABP6P51161 128 aa19.08■□□□□ 0.65
LDB1-201ENST00000361198 P2RY6Q15077 328 aa19.08■□□□□ 0.65
LDB1-201ENST00000361198 TMEM182Q6ZP80 229 aaPredicted RBP19.08■□□□□ 0.65
LDB1-201ENST00000361198 ZNF826PQ6ZT77 177 aa19.08■□□□□ 0.65
LDB1-201ENST00000361198 H1FOOQ8IZA3 346 aaPredicted RBP19.08■□□□□ 0.65
LDB1-201ENST00000361198 TMEM252Q8N6L7 170 aa19.08■□□□□ 0.65
LDB1-201ENST00000361198 UMAD1C9J7I0 102 aa19.08■□□□□ 0.64
LDB1-201ENST00000361198 HOXA4Q00056 320 aaPredicted RBP19.08■□□□□ 0.64
LDB1-201ENST00000361198 ID3Q02535 119 aa19.08■□□□□ 0.64
LDB1-201ENST00000361198 AKIRIN2Q53H80 203 aa19.08■□□□□ 0.64
LDB1-201ENST00000361198 BHLHA15Q7RTS1 189 aaPredicted RBP19.08■□□□□ 0.64
LDB1-201ENST00000361198 C11orf53Q8IXP5 236 aa19.08■□□□□ 0.64
LDB1-201ENST00000361198 RPRMLQ8N4K4 120 aa19.08■□□□□ 0.64
LDB1-201ENST00000361198 SLC25A31Q9H0C2 315 aa19.08■□□□□ 0.64
LDB1-201ENST00000361198 OR1A1Q9P1Q5 309 aa19.08■□□□□ 0.64
LDB1-201ENST00000361198 ERRFI1Q9UJM3 462 aaPredicted RBP19.08■□□□□ 0.64
LDB1-201ENST00000361198 IGHV2OR16-5A0A0B4J2B6 119 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 OR5H1A6NKK0 313 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 PROB1E7EW31 1015 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 SH2D1BO14796 132 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 SNRNP70P08621 437 aaKnown RBP19.07■□□□□ 0.64
LDB1-201ENST00000361198 VDAC1P21796 283 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 CEBPDP49716 269 aaPredicted RBP19.07■□□□□ 0.64
LDB1-201ENST00000361198 ASCL1P50553 236 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 CMTM1Q8IZ96 169 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 PRR18Q8N4B5 295 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 TMEM171Q8WVE6 324 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 ADAM20O43506 726 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 TIMM8AO60220 97 aaPredicted RBP19.07■□□□□ 0.64
LDB1-201ENST00000361198 MMP9P14780 707 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 ATP6V0CP27449 155 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 PPP1CCP36873 323 aaKnown RBP19.07■□□□□ 0.64
LDB1-201ENST00000361198 CXorf66Q5JRM2 361 aaPredicted RBP19.07■□□□□ 0.64
LDB1-201ENST00000361198 Q6ZR03 302 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 RBMXL3Q8N7X1 1067 aaKnown RBP19.07■□□□□ 0.64
LDB1-201ENST00000361198 FAM213BQ8TBF2 198 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 BCL2L14Q9BZR8 327 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 HES4Q9HCC6 221 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 OR14J1Q9UGF5 321 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 TRAPPC2LQ9UL33 140 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 FAM215AQ9Y5M1 114 aa19.07■□□□□ 0.64
LDB1-201ENST00000361198 CADP27708 2225 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 BSNQ9UPA5 3926 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 ANKRD11Q6UB99 2663 aaPredicted RBP19.06■□□□□ 0.64
LDB1-201ENST00000361198 PGLYRP1O75594 196 aaPredicted RBP19.06■□□□□ 0.64
LDB1-201ENST00000361198 CLINT1Q14677 625 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 BEND4Q6ZU67 534 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 IL22RA2Q969J5 263 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 MSL2Q9HCI7 577 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 KCNJ16Q9NPI9 418 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 FBXO7Q9Y3I1 522 aa19.06■□□□□ 0.64
LDB1-201ENST00000361198 C1orf196B1AJZ1 125 aa19.05■□□□□ 0.64
LDB1-201ENST00000361198 WNT9BO14905 357 aa19.05■□□□□ 0.64
LDB1-201ENST00000361198 KITLGP21583 273 aa19.05■□□□□ 0.64
LDB1-201ENST00000361198 EIF2S3P41091 472 aaKnown RBP19.05■□□□□ 0.64
LDB1-201ENST00000361198 RHEBQ15382 184 aa19.05■□□□□ 0.64
LDB1-201ENST00000361198 ODF3L1Q8IXM7 274 aa19.05■□□□□ 0.64
LDB1-201ENST00000361198 OR2G3Q8NGZ4 309 aa19.05■□□□□ 0.64
LDB1-201ENST00000361198 UBALD1Q8TB05 177 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms