RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 ADIRFQ15847 76 aa12.16□□□□□ -0.46
SIRPA-202ENST00000358771 BHLHA15Q7RTS1 189 aaPredicted RBP12.16□□□□□ -0.46
SIRPA-202ENST00000358771 LFNGQ8NES3 379 aa12.16□□□□□ -0.46
SIRPA-202ENST00000358771 RPUSD4Q96CM3 377 aaKnown RBP12.16□□□□□ -0.46
SIRPA-202ENST00000358771 NRIP2Q9BQI9 281 aa12.16□□□□□ -0.46
SIRPA-202ENST00000358771 RNF122Q9H9V4 155 aa12.16□□□□□ -0.46
SIRPA-202ENST00000358771 GCM1Q9NP62 436 aa12.16□□□□□ -0.46
SIRPA-202ENST00000358771 DKK1O94907 266 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 SRSF3P84103 164 aaKnown RBP12.15□□□□□ -0.46
SIRPA-202ENST00000358771 ZNF273Q14593 569 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 DNM1P46Q6ZS02 220 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 CISD2Q8N5K1 135 aaKnown RBP12.15□□□□□ -0.46
SIRPA-202ENST00000358771 FAM24BQ8N5W8 94 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 OR4A4PQ8NGN8 299 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 DECR2Q9NUI1 292 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 CA11O75493 328 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 HOXD4P09016 255 aaPredicted RBP12.15□□□□□ -0.46
SIRPA-202ENST00000358771 NAT1P18440 290 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 IGHV1-2P23083 117 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 SNCAP37840 140 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 CASP6P55212 293 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 PSG7Q13046 419 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 MOB1BQ7L9L4 216 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 NTNG2Q96CW9 530 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 MED9Q9NWA0 146 aa12.15□□□□□ -0.46
SIRPA-202ENST00000358771 TLN1Q9Y490 2541 aaKnown RBP12.14□□□□□ -0.47
SIRPA-202ENST00000358771 A8MXK9 166 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 OR2C1O95371 312 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 CFPP27918 469 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 WNT5AP41221 380 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 GFRALQ6UXV0 394 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 RSG1Q9BU20 258 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 GLRX2Q9NS18 164 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 PQLC2LA1A4F0 135 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 HLA-GP17693 338 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 RAB5CP51148 216 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 KLF3P57682 345 aaPredicted RBP12.14□□□□□ -0.47
SIRPA-202ENST00000358771 LYG1Q8N1E2 194 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 BCL2L2Q92843 193 aaPredicted RBP12.14□□□□□ -0.47
SIRPA-202ENST00000358771 BSCL2Q96G97 398 aaPredicted RBP12.14□□□□□ -0.47
SIRPA-202ENST00000358771 OR5B12Q96R08 314 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 COX5BP10606 129 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 SULT1A2P50226 295 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 HMGN3Q15651 99 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 WSB1Q9Y6I7 421 aa12.14□□□□□ -0.47
SIRPA-202ENST00000358771 TRGV8A0A0C4DH27 118 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 RRP8O43159 456 aaKnown RBP12.13□□□□□ -0.47
SIRPA-202ENST00000358771 ENSAO43768 121 aaKnown RBP12.13□□□□□ -0.47
SIRPA-202ENST00000358771 IL18BPO95998 194 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 MPV17P39210 176 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 HIST1H3AP68431 136 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 COL10A1Q03692 680 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 HIST2H3PS2Q5TEC6 136 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 DHRS11Q6UWP2 260 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 HIST2H3AQ71DI3 136 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 RAB40CQ96S21 281 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 HIPK2Q9H2X6 1198 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 IGF2RP11717 2491 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 ZNF503-AS2A6NEH8 195 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 MDH2P40926 338 aaKnown RBP12.13□□□□□ -0.47
SIRPA-202ENST00000358771 AWAT1Q58HT5 328 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 SELENOHQ8IZQ5 122 aaKnown RBP12.13□□□□□ -0.47
SIRPA-202ENST00000358771 NECAP1Q8NC96 275 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 GPR146Q96CH1 333 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 S1PR3Q99500 378 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 CFAP54Q96N23 3096 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 MYO15AQ9UKN7 3530 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 HOXA4Q00056 320 aaPredicted RBP12.13□□□□□ -0.47
SIRPA-202ENST00000358771 SLC38A11Q08AI6 406 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 PDZD11Q5EBL8 140 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 C9orf106Q8NAJ2 232 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 DMRTA2Q96SC8 542 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 SLC25A22Q9H936 323 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 CRIM1Q9NZV1 1036 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 MRPS18CQ9Y3D5 142 aaKnown RBP12.13□□□□□ -0.47
SIRPA-202ENST00000358771 CEP192Q8TEP8 1941 aa12.13□□□□□ -0.47
SIRPA-202ENST00000358771 HBZP02008 142 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 SSTR5P35346 364 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 GLIPR1P48060 266 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 CCL17Q92583 94 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 CLN8Q9UBY8 286 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 EML5Q05BV3 1969 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 IGKV3D-15A0A087WSY6 115 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 ZNF727A8MUV8 499 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 SMPD2O60906 423 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 OR8U8P0C7N1 319 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 S100PP25815 95 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 UBE2G2P60604 165 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 DCTN5Q9BTE1 182 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 SLC35B3Q9H1N7 401 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 LIME1Q9H400 295 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 PRR33A8MZF0 331 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 FGF7P21781 194 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 CCL8P80075 99 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 FOXF2Q12947 444 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 C4orf17Q53FE4 359 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 FAM201AQ5SY85 155 aa12.12□□□□□ -0.47
SIRPA-202ENST00000358771 Q6ZT83 130 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms