RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 CLN8Q9UBY8 286 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 CNOT1A5YKK6 2376 aaKnown RBP5.64□□□□□ -1.51
CSDE1-203ENST00000358528 PAGE4O60829 102 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 TMEM50AO95807 157 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 SELEP16581 610 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 RPL29P47914 159 aaKnown RBP5.64□□□□□ -1.51
CSDE1-203ENST00000358528 EDDM3BP56851 147 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 TMEM54Q969K7 222 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 SIRT7Q9NRC8 400 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 VAX2Q9UIW0 290 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 ANAPC10Q9UM13 185 aa5.64□□□□□ -1.51
CSDE1-203ENST00000358528 ARGFXA6NJG6 315 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 DVL1O14640 695 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 CA11O75493 328 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 CYB5R3P00387 301 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OPN1MWP04001 364 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OPN1MW2P0DN77 364 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OPN1MW3P0DN78 364 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 NDUFB7P17568 137 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 G6PCP35575 357 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 PLA2G5P39877 138 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 PKIAP61925 76 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 ZNF506Q5JVG8 444 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 SLC35E3Q7Z769 313 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 ZIC4Q8N9L1 334 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OR10G4Q8NGN3 311 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OR10G9Q8NGN4 311 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OR10G7Q8NGN6 311 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 IL22RA2Q969J5 263 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 APH1AQ96BI3 265 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 RCC1LQ96I51 464 aaKnown RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 PHF7Q9BWX1 381 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 SAMD10Q9BYL1 202 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 ZNF552Q9H707 407 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 SEBOXQ9HB31 216 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 POLEQ07864 2286 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 ELOA3CA0A087WX78 387 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 LOC102723971A0A1B0GUV8 181 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 hCG_38984A0A1B0GV85 526 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 PATE3B3GLJ2 98 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 FAM157AC9JC47 383 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 CEBPDP49716 269 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 PCOLCEQ15113 449 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 MSMO1Q15800 293 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 PDLIM3Q53GG5 364 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 KCNIP4Q6PIL6 250 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 TPRX1Q8N7U7 411 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OR10P1Q8NGE3 313 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 MRPL30Q8TCC3 161 aaKnown RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 CDH20Q9HBT6 801 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 GCM1Q9NP62 436 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 B4GALT7Q9UBV7 327 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 OR2W1Q9Y3N9 320 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 SPTBN2O15020 2390 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 A0A0G2JRQ6 117 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 SNRPCP09234 159 aaKnown RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 FOXG1P55316 489 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 ARG2P78540 354 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 H1FOOQ8IZA3 346 aaPredicted RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 HIST3H2BBQ8N257 126 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 CPEB3Q8NE35 698 aaKnown RBP5.63□□□□□ -1.51
CSDE1-203ENST00000358528 EGLN1Q9GZT9 426 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 CHRNA10Q9GZZ6 450 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 TUBG2Q9NRH3 451 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 TMEM131Q92545 1883 aa5.63□□□□□ -1.51
CSDE1-203ENST00000358528 REV3LO60673 3130 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 PRR14LQ5THK1 2151 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 USF3Q68DE3 2245 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 LRRC3CA6NJW4 275 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 IGLV3-19P01714 112 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 CD55P08174 381 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 EPHA8P29322 1005 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 STARD6P59095 220 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 UBE2NP61088 152 aaKnown RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 COL10A1Q03692 680 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 PNRC1Q12796 327 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 SLC25A53Q5H9E4 307 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 H2BFWTQ7Z2G1 175 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 CARFQ8N187 725 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 GATAD1Q8WUU5 269 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 TMEM18Q96B42 140 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 FAM103A1Q9BTL3 118 aaKnown RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 ELOVL1Q9BW60 279 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 DEFB127Q9H1M4 99 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 OR2D2Q9H210 308 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 SMDT1Q9H4I9 107 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 HEYLQ9NQ87 328 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 MTCH1Q9NZJ7 389 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 NAT8Q9UHE5 227 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 PITPNC1Q9UKF7 332 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 FZR1Q9UM11 496 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 BOKQ9UMX3 212 aaPredicted RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 MDFIC2A0A1B0GVS7 189 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 CDIPTO14735 213 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 TCAPO15273 167 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 RHBDL1O75783 438 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 SLC25A6P12236 298 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 HIST1H1BP16401 226 aaKnown RBP5.62□□□□□ -1.51
CSDE1-203ENST00000358528 CTSSP25774 331 aa5.62□□□□□ -1.51
CSDE1-203ENST00000358528 PAX6P26367 422 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms