RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 PMCHL2Q9BQD1 86 aa7.71□□□□□ -1.17
COL6A6-201ENST00000358511 IL19Q9UHD0 177 aa7.71□□□□□ -1.17
COL6A6-201ENST00000358511 UFC1Q9Y3C8 167 aa7.71□□□□□ -1.17
COL6A6-201ENST00000358511 OR2W1Q9Y3N9 320 aa7.71□□□□□ -1.17
COL6A6-201ENST00000358511 ZNF716A6NP11 495 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 OR4P4Q8NGL7 312 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 ALG14Q96F25 216 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 IGHV3-64DA0A0J9YX35 117 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 MPLP40238 635 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 ZXDAP98168 799 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 PGLYRP3Q96LB9 341 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 GUCD1Q96NT3 240 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 SLC7A10Q9NS82 523 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 A0A087WWC5 75 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 AMY1AP04745 511 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 ACP1P24666 158 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 DSCR4P56555 118 aaPredicted RBP7.71□□□□□ -1.18
COL6A6-201ENST00000358511 CLDN18P56856 261 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 MESTQ5EB52 335 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 NIT1Q86X76 327 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 C10orf126Q8N4M7 172 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 LRRC75AQ8NAA5 344 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 TMEM230Q96A57 120 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 FOXC2Q99958 501 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 CACNA1EQ15878 2313 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 NGFP01138 241 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 CRYABP02511 175 aaKnown RBP7.71□□□□□ -1.18
COL6A6-201ENST00000358511 TMEM136Q6ZRR5 245 aa7.71□□□□□ -1.18
COL6A6-201ENST00000358511 VMA21Q3ZAQ7 101 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 OR4C3Q8NH37 302 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 SSMEM1Q8WWF3 244 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 H0Y8X5 98 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 TSPAN13O95857 204 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 MDKP21741 143 aaPredicted RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 OR13H1Q8NG92 308 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 ADTRPQ96IZ2 230 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 TOX2Q96NM4 488 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 PSG11Q9UQ72 335 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 HCFC2Q9Y5Z7 792 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 HCFC1P51610 2035 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 ZNF785A8K8V0 405 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 HKR1P10072 659 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 DEFB103AP81534 67 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 EIF3IQ13347 325 aaKnown RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 RAB37Q96AX2 223 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 MISP3Q96FF7 219 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 NDUFAF3Q9BU61 184 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 ZBP1Q9H171 429 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 IL36GQ9NZH8 169 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 WISP3O95389 354 aaPredicted RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 COMPP49747 757 aaPredicted RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 VSIG8P0DPA2 414 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 SAPCD1Q5SSQ6 148 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 FNDC7Q5VTL7 733 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 WDR25Q64LD2 544 aaPredicted RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 ZNF519Q8TB69 540 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 AQP3Q92482 292 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 ZDHHC8Q9ULC8 765 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 LEPROTL1O95214 131 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 NANOS3P60323 173 aaKnown RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 CEACAM16Q2WEN9 425 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 ZNF774Q6NX45 483 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 TEPPQ6URK8 271 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 OR1K1Q8NGR3 316 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 OR6X1Q8NH79 312 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 CDX2Q99626 313 aaPredicted RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 EMP1P54849 157 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 RARRES2Q99969 163 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 DNAJC4Q9NNZ3 241 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 PRKNO60260 465 aaPredicted RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 HIST1H1BP16401 226 aaKnown RBP7.7□□□□□ -1.18
COL6A6-201ENST00000358511 C5orf17Q8NAS9 161 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 TMEM222Q9H0R3 208 aa7.7□□□□□ -1.18
COL6A6-201ENST00000358511 ARFGEF3Q5TH69 2177 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 PLXNB3Q9ULL4 1909 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 LOC390937A0A1W2PQ73 354 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 MPDU1O75352 247 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 MRPL58Q14197 206 aaKnown RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 SPATA46Q5T0L3 261 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 OR8G5Q8NG78 346 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 MIEN1Q9BRT3 115 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 OR2T8A6NH00 312 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 H0Y980 276 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 LINC01387J3KSC0 135 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 MYOZ3Q8TDC0 251 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 MRPS18BQ9Y676 258 aaKnown RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 NBASA2RRP1 2371 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.69□□□□□ -1.18
COL6A6-201ENST00000358511 M0R296 226 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 RBP4P02753 201 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 KMT5CQ86Y97 462 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 AMER3Q8N944 861 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 MOB3AQ96BX8 217 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 R3HDM4Q96D70 268 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 TUBA4BQ9H853 241 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 SHANK3Q9BYB0 1731 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 THADAQ6YHU6 1953 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 FAM181BA6NEQ2 426 aa7.69□□□□□ -1.18
COL6A6-201ENST00000358511 CYR61O00622 381 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms