RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 SUMO4Q6EEV6 95 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 VN1R17PQ8TDU5 208 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 PPP1R1CQ8WVI7 109 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 TOLLIPQ9H0E2 274 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 TIAM2Q8IVF5 1701 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 HPXP02790 462 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 ALPLP05186 524 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 CELA2BP08218 269 aaPredicted RBP8.57□□□□□ -1.04
CHD3-202ENST00000358181 CD33P20138 364 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 DCTDP32321 178 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 RPS19P39019 145 aaKnown RBP8.57□□□□□ -1.04
CHD3-202ENST00000358181 TMEM196Q5HYL7 178 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 MBNL2Q5VZF2 373 aaKnown RBP8.57□□□□□ -1.04
CHD3-202ENST00000358181 FAM159AQ6UWV7 190 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 TMEM167BQ9NRX6 74 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 COL16A1Q07092 1604 aaPredicted RBP8.57□□□□□ -1.04
CHD3-202ENST00000358181 AHDC1Q5TGY3 1603 aaPredicted RBP8.57□□□□□ -1.04
CHD3-202ENST00000358181 TCRBV3S1A0A5B6 114 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 TARM1B6A8C7 271 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 GLMPQ8WWB7 406 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 KCTD12Q96CX2 325 aaKnown RBP8.57□□□□□ -1.04
CHD3-202ENST00000358181 SERGEFQ9UGK8 458 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 CNTRLQ7Z7A1 2325 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 HMGN4O00479 90 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 OR4X2Q8NGF9 303 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 PAXXQ9BUH6 204 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 CST9LQ9H4G1 147 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 NRAPQ86VF7 1730 aa8.57□□□□□ -1.04
CHD3-202ENST00000358181 TPRX1Q8N7U7 411 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 TNFRSF12AQ9NP84 129 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 TNRC6CQ9HCJ0 1690 aaKnown RBP8.56□□□□□ -1.04
CHD3-202ENST00000358181 A0A087WUJ7 227 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 CD8AP01732 235 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 KISS1Q15726 138 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 TMEM255AQ5JRV8 349 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 PAM16Q9Y3D7 125 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 RPL31P62899 125 aaKnown RBP8.56□□□□□ -1.04
CHD3-202ENST00000358181 NPAP1Q9NZP6 1156 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 TCRBV4S1A1TA0A5B7 111 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 C10orf128Q5T292 105 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 JMJD6Q6NYC1 403 aaPredicted RBP8.56□□□□□ -1.04
CHD3-202ENST00000358181 FOXB2Q5VYV0 432 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 OR2T10Q8NGZ9 312 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 PDLIM5Q96HC4 596 aaKnown RBP8.56□□□□□ -1.04
CHD3-202ENST00000358181 LHX9Q9NQ69 397 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 TMEM106BQ9NUM4 274 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 ARNTLO00327 626 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 ETHE1O95571 254 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 GAPDHP04406 335 aaKnown RBP8.56□□□□□ -1.04
CHD3-202ENST00000358181 PCP4P48539 62 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 NPC2P61916 151 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 MAP1LC3AQ9H492 121 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 ALS2Q96Q42 1657 aa8.56□□□□□ -1.04
CHD3-202ENST00000358181 MPZL1O95297 269 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 VDAC2P45880 294 aaPredicted RBP8.55□□□□□ -1.04
CHD3-202ENST00000358181 PRSS53Q2L4Q9 553 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 OR10AC1Q8NH08 325 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 TUBD1Q9UJT1 453 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 TMEM229AB2RXF0 380 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 TCF21O43680 179 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 TSPOP30536 169 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 RND2P52198 227 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 PRICKLE4Q2TBC4 344 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 ZNF383Q8NA42 475 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 B9D1Q9UPM9 204 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 SMCHD1A6NHR9 2005 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 ADAMTSL3P82987 1691 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 LOC105371242A0A075B767 164 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 CLDN14O95500 239 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 TRGV3P03979 118 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 UCNP55089 124 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 PLP1P60201 277 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 PRB3Q04118 309 aaPredicted RBP8.55□□□□□ -1.04
CHD3-202ENST00000358181 PRELID3AQ96N28 172 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 OR2A5Q96R48 311 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 WBP1LQ9NX94 342 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 SLC25A37Q9NYZ2 338 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 PSORS1C1Q9UIG5 152 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 C19orf53Q9UNZ5 99 aaPredicted RBP8.55□□□□□ -1.04
CHD3-202ENST00000358181 MUC21A0A0G2JKD1 596 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 MUC21A0A140T8X8 626 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 FCMRO60667 390 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 MUC21Q5SSG8 566 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 TMEM42Q69YG0 159 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 ZDHHC22Q8N966 263 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 SPSB2Q99619 263 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 FOXI3A8MTJ6 420 aaPredicted RBP8.55□□□□□ -1.04
CHD3-202ENST00000358181 INS-IGF2F8WCM5 200 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 HOXC11O43248 304 aaPredicted RBP8.55□□□□□ -1.04
CHD3-202ENST00000358181 INSP01308 110 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 CCL4P13236 92 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 PWWP2BQ6NUJ5 590 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 FDCSPQ8NFU4 85 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 ZFP64Q9NPA5 681 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 IGLV3-10A0A075B6K4 115 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 STPG1Q5TH74 334 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 RPS4Y2Q8TD47 263 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 GPBAR1Q8TDU6 330 aa8.55□□□□□ -1.04
CHD3-202ENST00000358181 CDCA4Q9BXL8 241 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms