RNA–Protein interactions for RNA: ENST00000356805.8

SPTBN1-202, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN1, Length 8,482 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-202ENST00000356805 HMGA1P17096 107 aaKnown RBP10.12□□□□□ -0.79
SPTBN1-202ENST00000356805 GALNSP34059 522 aa10.12□□□□□ -0.79
SPTBN1-202ENST00000356805 FAM53AQ6NSI3 398 aaPredicted RBP10.12□□□□□ -0.79
SPTBN1-202ENST00000356805 ZBTB34Q8NCN2 500 aa10.12□□□□□ -0.79
SPTBN1-202ENST00000356805 C1RLQ9NZP8 487 aa10.12□□□□□ -0.79
SPTBN1-202ENST00000356805 MUC1P15941 1255 aaPredicted RBP10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 RND1Q92730 232 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 FOXC2Q99958 501 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 RAB29O14966 203 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 PPP1R17O96001 155 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 CA2P00918 260 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 HBZP02008 142 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 POLR2GP62487 172 aaKnown RBP eCLIP10.11□□□□□ -0.794e-7■□□□□ 8.8
SPTBN1-202ENST00000356805 MRPS11P82912 194 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 IER3P46695 156 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 TRIP6Q15654 476 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 MRPL30Q8TCC3 161 aaKnown RBP10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 SLC6A13Q9NSD5 602 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 TUBGCP6Q96RT7 1819 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 PRF1P14222 555 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 GFRA1P56159 465 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 GPR27Q9NS67 375 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 PIPOXQ9P0Z9 390 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 SNURFLB1AK76 121 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 EMP1P54849 157 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 MPZL1O95297 269 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 PTPRZ1P23471 2315 aaPredicted RBP10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 IGLV3-16A0A075B6K0 115 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 TRBV5-3A0A0A0MS03 114 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 CEACAM5P06731 702 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 ACER2Q5QJU3 275 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 VAX1Q5SQQ9 334 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 EBLN2Q6P2I7 272 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 THSD4Q6ZMP0 1018 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 FANCMQ8IYD8 2048 aa10.11□□□□□ -0.79
SPTBN1-202ENST00000356805 MPDU1O75352 247 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 HOXD4P09016 255 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 REG1BP48304 166 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 C16orf47Q6ZP98 133 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 OR1K1Q8NGR3 316 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 VSTM2AQ8TAG5 236 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 HIST1H1BP16401 226 aaKnown RBP10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 SPEM1Q8N4L4 309 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 ZNF441Q8N8Z8 693 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 SYT8Q8NBV8 401 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 HARBI1Q96MB7 349 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 AURKAIP1Q9NWT8 199 aaPredicted RBP10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 PEF1Q9UBV8 284 aaKnown RBP10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 HSF4Q9ULV5 492 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 STARD10Q9Y365 291 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 A0A0B4J293 547 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 A0A1B0GTL3 188 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 CA11O75493 328 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 Q6ZS52 159 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 METTL12A8MUP2 240 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 CTSVO60911 334 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 SOSTQ9BQB4 213 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 TMEM38BQ9NVV0 291 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 IGHV5-51A0A0C4DH38 117 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 CXCL2P19875 107 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 MPLP40238 635 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 SPATA45Q537H7 98 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 SLC25A34Q6PIV7 304 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 SGMS2Q8NHU3 365 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 AQP10Q96PS8 301 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 CACNG7P62955 275 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 LDLRAD3Q86YD5 345 aa10.1□□□□□ -0.79
SPTBN1-202ENST00000356805 MEF2BQ02080 365 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 TTC32Q5I0X7 151 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 RSPO2Q6UXX9 243 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 KCNE5Q9UJ90 142 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 EWSR1Q01844 656 aaKnown RBP eCLIP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 SLC23A3Q6PIS1 610 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 CARHSP1Q9Y2V2 147 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 HOXC4P09017 264 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 OR8G5Q8NG78 346 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 EML2O95834 649 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 OR10J6PQ8NGY7 276 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 ADAMTS17Q8TE56 1095 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 CHD3Q12873 2000 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 DDX60LQ5H9U9 1706 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 KCNE1BA0A087WTH5 132 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 A0A1B0GTH9 108 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 ATXN7O15265 892 aaPredicted RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 CHST1O43916 411 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 COX6CP09669 75 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 TMEM255AQ5JRV8 349 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 EID2BQ96D98 161 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 FAM206AQ9NX38 181 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 LOC105371267A0A1B0GV96 52 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 SNRPCP09234 159 aaKnown RBP10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 AESQ08117 197 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 C1orf210Q8IVY1 113 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 ID4P47928 161 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 GCSAMLQ5JQS6 135 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 LINC00596Q86U02 117 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 TSPAN32Q96QS1 320 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 GSN-AS1Q9NRJ2 163 aa10.09□□□□□ -0.79
SPTBN1-202ENST00000356805 RGPD4Q7Z3J3 1758 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms