RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 FAM169BQ8N8A8 192 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 FBLIM1Q8WUP2 373 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 SAP30LQ9HAJ7 183 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 IL4P05112 153 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 CEACAM3P40198 252 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 KIR3DL2P43630 455 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 GGACTQ9BVM4 153 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 SLC52A3Q9NQ40 469 aa9.67□□□□□ -0.86
GTF3C1-201ENST00000356183 RBFOX2O43251 390 aaKnown RBP eCLIP9.66□□□□□ -0.862e-8■□□□□ 10.9
GTF3C1-201ENST00000356183 CEACAM5P06731 702 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 PRSS2P07478 247 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 BCL2P10415 239 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 EPHA8P29322 1005 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 ROM1Q03395 351 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 ABHD14BQ96IU4 210 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 LRRC3BQ96PB8 259 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 WNT16Q9UBV4 365 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 NINQ8N4C6 2090 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 DDX60LQ5H9U9 1706 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 F2RL2O00254 374 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 HOXD4P09016 255 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 SURF2Q15527 256 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 TMEM95Q3KNT9 176 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 MRGPRX1Q96LB2 322 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 WNT5BQ9H1J7 359 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 IL19Q9UHD0 177 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 IGKV3OR2-268A0A0C4DH90 116 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 FFAR1O14842 300 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 REG1BP48304 166 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 EFNB2P52799 333 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 SMOC1Q9H4F8 434 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 TBX21Q9UL17 535 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 OGG1O15527 345 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 TFPI2P48307 235 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 PQLC2Q6ZP29 291 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 MOB4Q9Y3A3 225 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 TBL2Q9Y4P3 447 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 PXMP4Q9Y6I8 212 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 A0A1B0GU03 582 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 GRIFINA4D1Z8 144 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 DLX6P56179 175 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 PSG6Q00889 435 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 C3AR1Q16581 482 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 DCAF12L2Q5VW00 463 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 OR2V2Q96R30 315 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 NRIP2Q9BQI9 281 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 ARRDC1-AS1Q9H2J1 176 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 MPTX1A8MV57 137 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 CFDP00746 253 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 FOLR2P14207 255 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 ID1P41134 155 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 JOSD1Q15040 202 aaPredicted RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 MESTQ5EB52 335 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 MOGAT3Q86VF5 341 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 SGK494Q96LW2 274 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 HARBI1Q96MB7 349 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 IP6K3Q96PC2 410 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 NUDT16L1Q9BRJ7 211 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 TMUB1Q9BVT8 246 aa9.66□□□□□ -0.86
GTF3C1-201ENST00000356183 PQLC2LA1A4F0 135 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 MVB12AQ96EY5 273 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 LINC00615Q96LM1 132 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 P2RX4Q99571 388 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 COL22A1Q8NFW1 1626 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 NRAPQ86VF7 1730 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 OR2A4O95047 310 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 BHLHA15Q7RTS1 189 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 REC114Q7Z4M0 266 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 RND1Q92730 232 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 OR2A7Q96R45 310 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 MAP1LC3AQ9H492 121 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 IGHV3OR16-12A0A075B7B8 117 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 PNLIPP16233 465 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 GAB4Q2WGN9 574 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 MEIG1Q5JSS6 88 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 OR8B2Q96RD0 313 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 R4GN57 208 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 SEC11BP0C7V7 166 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 BIVMQ86UB2 503 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 H1FOOQ8IZA3 346 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 OR13C6PQ8NH95 151 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 VSTM2AQ8TAG5 236 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 CITED2Q99967 270 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 MRPL16Q9NX20 251 aaKnown RBP9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 PRNDQ9UKY0 176 aa9.65□□□□□ -0.86
GTF3C1-201ENST00000356183 ZNFX1Q9P2E3 1918 aaKnown RBP9.65□□□□□ -0.87
GTF3C1-201ENST00000356183 LRRC61Q9BV99 259 aa9.65□□□□□ -0.87
GTF3C1-201ENST00000356183 DMRT1Q9Y5R6 373 aa9.65□□□□□ -0.87
GTF3C1-201ENST00000356183 ATG2BQ96BY7 2078 aa9.65□□□□□ -0.87
GTF3C1-201ENST00000356183 TRAV38-1A0A0B4J264 116 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 MGAT2Q10469 447 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 FOXC1Q12948 553 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 VSIG10L2P0DP72 767 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 SRIP30626 198 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 TM4SF4P48230 202 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 ZNF660Q6AZW8 331 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 SYT8Q8NBV8 401 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 OR2Y1Q8NGV0 311 aa9.64□□□□□ -0.87
GTF3C1-201ENST00000356183 GMPPAQ96IJ6 420 aaPredicted RBP9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms