RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 TMEM56Q96MV1 263 aa21.46■■□□□ 1.03
CLK2-201ENST00000355560 TMEM56-RWDD3S4R434 201 aa21.46■■□□□ 1.03
CLK2-201ENST00000355560 SMG1Q96Q15 3661 aaKnown RBP21.46■■□□□ 1.03
CLK2-201ENST00000355560 DSCAMO60469 2012 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 NBEAQ8NFP9 2946 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 TPRP12270 2363 aaKnown RBP21.45■■□□□ 1.02
CLK2-201ENST00000355560 DIDO1Q9BTC0 2240 aaKnown RBP21.45■■□□□ 1.02
CLK2-201ENST00000355560 H0Y980 276 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 MGST3O14880 152 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 CD55P08174 381 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 TGIF2LYQ8IUE0 185 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 CA5BP1Q8WTZ4 195 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 RRNAD1Q96FB5 475 aaKnown RBP21.45■■□□□ 1.02
CLK2-201ENST00000355560 LURAP1Q96LR2 239 aa21.45■■□□□ 1.02
CLK2-201ENST00000355560 E7EQL1 145 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 ERVH48-1M5A8F1 160 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 BCL2L11O43521 198 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 SPDEFO95238 335 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 IRF2P14316 349 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 F2RP25116 425 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 UCP1P25874 307 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 OR52L2PQ8NGH6 319 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 OR51H1Q8NH63 302 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 OR1S1Q8NH92 325 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 DCTN5Q9BTE1 182 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 PKDREJQ9NTG1 2253 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 KALRNO60229 2985 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 MED19A0JLT2 244 aaPredicted RBP21.44■■□□□ 1.02
CLK2-201ENST00000355560 K7N7A8 449 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 SCGB1D2O95969 90 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 CD3EP07766 207 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 GNMTQ14749 295 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 NINJ1Q92982 152 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 ARL11Q969Q4 196 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 CNTNAP3BQ96NU0 1288 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 CNTNAP3Q9BZ76 1288 aa21.44■■□□□ 1.02
CLK2-201ENST00000355560 ODAMA1E959 279 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 CDS2O95674 445 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 AKR1E2Q96JD6 320 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 DCAF16Q9NXF7 216 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 STUMQ69YW2 141 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 FAM53AQ6NSI3 398 aaPredicted RBP21.43■■□□□ 1.02
CLK2-201ENST00000355560 TRAT1Q6PIZ9 186 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 ALKAL2Q6UX46 152 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 SELENOHQ8IZQ5 122 aaKnown RBP21.43■■□□□ 1.02
CLK2-201ENST00000355560 DEFB108BQ8NET1 73 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 SAP30LQ9HAJ7 183 aa21.43■■□□□ 1.02
CLK2-201ENST00000355560 SELLP14151 372 aa21.42■■□□□ 1.02
CLK2-201ENST00000355560 RAI1Q7Z5J4 1906 aaPredicted RBP21.42■■□□□ 1.02
CLK2-201ENST00000355560 ZNF561Q8N587 486 aa21.42■■□□□ 1.02
CLK2-201ENST00000355560 OR52M1Q8NGK5 317 aa21.42■■□□□ 1.02
CLK2-201ENST00000355560 OR5D13Q8NGL4 314 aa21.42■■□□□ 1.02
CLK2-201ENST00000355560 RFESDQ8TAC1 157 aa21.42■■□□□ 1.02
CLK2-201ENST00000355560 LRRC46Q96FV0 321 aa21.42■■□□□ 1.02
CLK2-201ENST00000355560 LSM5Q9Y4Y9 91 aaKnown RBP21.42■■□□□ 1.02
CLK2-201ENST00000355560 MSGN1A6NI15 193 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 EDDM3BP56851 147 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 FAM209AQ5JX71 171 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 PCNPQ8WW12 178 aaKnown RBP21.41■■□□□ 1.02
CLK2-201ENST00000355560 RBPMSQ93062 196 aaKnown RBP21.41■■□□□ 1.02
CLK2-201ENST00000355560 OR2S2Q9NQN1 319 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 PKD1L2Q7Z442 2459 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 ANKHD1Q8IWZ3 2542 aaKnown RBP21.41■■□□□ 1.02
CLK2-201ENST00000355560 C15orf65H3BRN8 121 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 SPINT2O43291 252 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 DEDDO75618 318 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 B3GALNT1O75752 331 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 PPP1CCP36873 323 aaKnown RBP21.41■■□□□ 1.02
CLK2-201ENST00000355560 NUP62P37198 522 aaPredicted RBP21.41■■□□□ 1.02
CLK2-201ENST00000355560 SMCO1Q147U7 214 aa21.41■■□□□ 1.02
CLK2-201ENST00000355560 RPS10-NUDT3A0A1W2PQS6 291 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 MBPP02686 304 aaPredicted RBP21.4■■□□□ 1.02
CLK2-201ENST00000355560 P2RX3P56373 397 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 UBA52P62987 128 aaKnown RBP21.4■■□□□ 1.02
CLK2-201ENST00000355560 DRAM1Q8N682 238 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 SDSLQ96GA7 329 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 ARPC5LQ9BPX5 153 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 ZNF471Q9BX82 626 aaPredicted RBP21.4■■□□□ 1.02
CLK2-201ENST00000355560 GSX2Q9BZM3 304 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 EGLN1Q9GZT9 426 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DYNLRB1Q9NP97 96 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 A0A1B0GW55 424 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 TMEM8BA6NDV4 472 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 LRRC30A6NM36 301 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4L2P0CJ85 424 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4L3P0CJ86 424 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4L4P0CJ87 422 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4L5P0CJ88 424 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4L6P0CJ89 424 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4L7P0CJ90 424 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4L9Q6RFH8 374 aaPredicted RBP21.4■■□□□ 1.02
CLK2-201ENST00000355560 ST8SIA2Q92186 375 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 AQP10Q96PS8 301 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 TOLLIPQ9H0E2 274 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 OR2D2Q9H210 308 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 KCNJ16Q9NPI9 418 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 DUX4Q9UBX2 424 aa21.4■■□□□ 1.02
CLK2-201ENST00000355560 IGHV3-43A0A0B4J1X8 118 aa21.39■■□□□ 1.01
CLK2-201ENST00000355560 PLAUP00749 431 aa21.39■■□□□ 1.01
CLK2-201ENST00000355560 RLN2P04090 185 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms